Gene PG1070 details

Gene Information

• Locus tag: PG1070
• Symbol: kamA
• ID: 2553203
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 1136769
• End bp: 1138019
• Gene Length: 1251 bp
• Protein Length: 416 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637149771
• Product: L-lysine 2,3-aminomutase
• Protein accession: NP_905285
• Protein GI: 34540806
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1509] Lysine 2,3-aminomutase
• TIGRFAM ID: [TIGR00238] KamA family protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.628059
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAGAAA GTCGTAGAAA GTATTATTTC CCTGATGTCA CCGATGAGCA ATGGAACGAC 
TGGCATTGGC AGGTCCTCAA TCGAATTGAG ACGCTCGACC AGCTGAAAAA GTACGTTACA 
CTCACCGCTG AAGAAGAAGA GGGAGTAAAA GAATCGCTCA AAGTACTCCG AATGGCTATC 
ACACCTTATT ATTTGAGTTT GATAGACCCC GAGAATCCTA ATTGTCCGAT TCGTAAACAA 
GCCATTCCTA CTCATCAGGA ACTGGTACGT GCTCCTGAAG ATCAGGTAGA CCCACTTAGT 
GAAGATGAAG ATTCGCCCGT ACCCGGACTG ACTCATCGTT ATCCGGATCG TGTATTGTTC 
CTTATCACGG ACAAATGTTC GATGTACTGT CGTCATTGTA CTCGCCGTCG CTTCGCAGGA 
CAGAAAGATG CTTCTTCTCC TTCTGAGCGC ATCGATCGAT GCATTGACTA TATAGCCAAT 
ACACCGACAG TCCGCGATGT TTTGCTATCG GGAGGCGATG CCCTCCTTGT CAGCGACGAA 
CGCTTGGAAT ACATATTGAA GCGTCTGCGC GAAATACCTC ATGTGGAGAT TGTTCGTATA 
GGAAGCCGTA CGCCGGTAGT CCTTCCTCAG CGTATAACGC CTCAATTGGT GGATATGCTC 
AAAAAATATC ATCCGGTGTG GCTGAACACT CACTTCAACC ACCCGAATGA AGTTACCGAA 
GAAGCAGTAG AGGCTTGTGA AAGAATGGCC AATGCCGGTA TTCCGTTGGG TAACCAAACG 
GTTTTATTGC GTGGAATCAA TGATTGTACA CATGTGATGA AGAGATTGGT ACATTTGCTG 
GTAAAGATGC GTGTGCGTCC TTACTATATA TATGTATGCG ATCTTTCGCT TGGAATAGGT 
CATTTCCGCA CGCCGGTATC TAAAGGAATC GAAATTATCG AAAATTTGCG CGGACACACC 
TCGGGCTATG CTGTTCCTAC CTTTGTGGTA GATGCTCCGG GGGGTGGTGG TAAGATACCT 
GTAATGCCGA ACTATGTTGT ATCTCAGTCC CCACGACATG TGGTTCTTCG CAATTATGAA 
GGTGTTATCA CAACCTATAC GGAGCCGGAG AATTATCATG AGGAGTGTGA TTGTGAGGAC 
TGTCGAGCCG GTAAGCATAA AGAGGGTGTA GCTGCACTTT CCGGAGGTCA GCAGTTGGCT 
ATCGAGCCTT CCGACTTAGC TCGCAAAAAA CGCAAGTTTG ATAAGAACTG A 

 

Protein sequence

MAESRRKYYF PDVTDEQWND WHWQVLNRIE TLDQLKKYVT LTAEEEEGVK ESLKVLRMAI 
TPYYLSLIDP ENPNCPIRKQ AIPTHQELVR APEDQVDPLS EDEDSPVPGL THRYPDRVLF 
LITDKCSMYC RHCTRRRFAG QKDASSPSER IDRCIDYIAN TPTVRDVLLS GGDALLVSDE 
RLEYILKRLR EIPHVEIVRI GSRTPVVLPQ RITPQLVDML KKYHPVWLNT HFNHPNEVTE 
EAVEACERMA NAGIPLGNQT VLLRGINDCT HVMKRLVHLL VKMRVRPYYI YVCDLSLGIG 
HFRTPVSKGI EIIENLRGHT SGYAVPTFVV DAPGGGGKIP VMPNYVVSQS PRHVVLRNYE 
GVITTYTEPE NYHEECDCED CRAGKHKEGV AALSGGQQLA IEPSDLARKK RKFDKN