| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG1060 |
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| Symbol | |
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| ID | 2553114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1126798 |
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| End bp | 1128507 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637149762 |
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| Product | carboxyl-terminal protease |
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| Protein accession | NP_905276 |
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| Protein GI | 34540797 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0865615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CCAATCTGTT TTTATCTCTG CTGGTGATCT TTATCACCGG TAGTTTTATG
ACTGCCTGTG CACAGAAGTC CAAGACGAAC AAACTCACCG AAGAAGATCG GAGCCGCAAT
GAGTATGTAC AGTCGATGGA TGTGCTTAGC AATATTATCG GTAACGTCAG GCTGTATTTC
GTCGATACCA TAAGTATCAA ACATATGACT CGGCGTGGTA TAGATGCGAT GTTGGGCGGG
CTTGACCCCT ATACCGAATA CATTCCTTAC GAGGAAATGG ATGAACTGAA ATTGATGACT
ACGGGAGAGT ATGCCGGAGT CGGAGCTATC ATATCGCAGC GCCCGGATAG TGCTGTGATT
ATCCAGAGAC CTATGGAAGG TATGCCCGCA GACGAAGCAG GATTGATAGC AGGCGACCGC
ATCCTGACTA TCGATGGGAA AGACTTCCGC AAATCCACCA CACCGAAAGT AAGCCAAGCA
CTGAAAGGGA TAGCCGGTAC TGTTGCAAAG GTGACAGTAA TGCGCTATGG CGAAACCAAA
CCTCGTACTT TTTCCGTGAA ACGTCAAAAA GTGATTATGA ATTCCGTCAC TTACAGCGGA
ATGCTCGATG GCTCGATAGG ATATATCCGC TTGAACAACT TTACGGACAA AAGTGCAGAA
GAGGTGCGCA CGGCCTTGTT GGATCTTCGT GACAAACAAG GAGCGAAAGG TCTCATTTTG
GATTTAAGAG GCAATGGTGG CGGACTGATG CAGGCTGCTA TCGAGATAGT CAATCTGTTC
GTCCCTAAGG GCAAAGAGGT GGTAACGACC AAAGGTCGCA TTGCAGAGTC GGCGTCCGTA
TTTCGCACAT TGACTGAACC GATCGACACG AAACTCCCGA TAGTAGTCCT GATCGATGGA
CAATCGGCAT CTTCCTCGGA GATTGTAGCC GGAGCACTGC AGGATATGGA CAGGGCTGTA
CTGATGGGAC AAAAGAGCTA TGGCAAAGGG CTTGTACAAA CGACTCGTCA GCTACCATAC
AACGGCGTGA TCAAATTGAC TACGGCCAAG TACTACATCC CAAGCGGACG TTGTATTCAG
CGTTTGGACT ACAGCCGCAC CAATCGGACA GGTATGGCAA CGGCCATTCC TGACAGTCTG
CACAAAATCT TTTACACTGC TGCCGGAAGA CGTGTAGAAG ATGCAGGAGG AATCCTGCCT
GACATCGAGG TCAAACAAGA TACAGCTGCG ACATTACTTT ATTATATGGC CATCAATAAT
GACGTTTTCG ATTTCGTCAC AGGTTATGTG CTCAAGCATA AAACGATTGC CAAGCCGGAG
GATTTTTCCA TAACGAACGA GGACTATGCA GCTTTCTGCA AGATGATGGA AGAAAAGAAA
TTTGACTATG ATCGCCAGAG TGGCAAGATG CTTGACAAAC TGGAGGAACT GGCTAAGATA
GAAGGCTACC TGCCGGAAGC CAACTCGGAG CTTAAAGCAC TACGCGAAAA GCTAAAACCC
AACCTGTCGC GTGATCTGCT ACGATTCAAA AAGGAGATAA CAAACTATCT CAACAATGAG
ATTGTCACTC GCTATTATTA TGAGCGAGGC AGTATCCGCC AGAGTTTGCC GGAAGATAAG
GTAGTCAAAG AAGCTATTAA GCTGCTGAAG GACCATCCGG AACAAATTCG ACAGATCCTT
GCAGCTCCGA AAGCAGAGAA TAAAGGGTAA
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| Protein sequence | MKKTNLFLSL LVIFITGSFM TACAQKSKTN KLTEEDRSRN EYVQSMDVLS NIIGNVRLYF
VDTISIKHMT RRGIDAMLGG LDPYTEYIPY EEMDELKLMT TGEYAGVGAI ISQRPDSAVI
IQRPMEGMPA DEAGLIAGDR ILTIDGKDFR KSTTPKVSQA LKGIAGTVAK VTVMRYGETK
PRTFSVKRQK VIMNSVTYSG MLDGSIGYIR LNNFTDKSAE EVRTALLDLR DKQGAKGLIL
DLRGNGGGLM QAAIEIVNLF VPKGKEVVTT KGRIAESASV FRTLTEPIDT KLPIVVLIDG
QSASSSEIVA GALQDMDRAV LMGQKSYGKG LVQTTRQLPY NGVIKLTTAK YYIPSGRCIQ
RLDYSRTNRT GMATAIPDSL HKIFYTAAGR RVEDAGGILP DIEVKQDTAA TLLYYMAINN
DVFDFVTGYV LKHKTIAKPE DFSITNEDYA AFCKMMEEKK FDYDRQSGKM LDKLEELAKI
EGYLPEANSE LKALREKLKP NLSRDLLRFK KEITNYLNNE IVTRYYYERG SIRQSLPEDK
VVKEAIKLLK DHPEQIRQIL AAPKAENKG
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