Gene PG1014 details

Gene Information

• Locus tag: PG1014
• ID: 2553047
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 1073903
• End bp: 1075915
• Gene Length: 2013 bp
• Protein Length: 670 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637149721
• Product: TPR domain-containing protein
• Protein accession: NP_905236
• Protein GI: 34540757
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3063] Tfp pilus assembly protein PilF

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 0.321969
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAAGGAT CACAACAAAC AATCACATCC AAGCAGCTTG TCAGGATGCT GAAAGATGCT 
TCGAGAGGAT CGAAGGGGAA AGGATCGGGA GAAATGAAAT TTTGTTTCCT GATAGGAGCC 
GGAGCCTCCA TCTCTTCCGG TATTCCCTCG GGTGCGAAGT TGGCTTGGGA CTGGCTTCAG 
CAGATAAAAG AGGACTGTGA CGGGGAGGAT TTCGAAGACT GGAAAATCGA AATCAAGATG 
CCCGATCAGC ATATTGAAGA AAGAGTAGGA GAGTTTTATC CCGAGATTTA TGAAAAGCGA 
TTCGGTCATG CCCCCGAAAC CGGCTATGAT TATATCAGAG GTCTTATGGA AGGCCGAGAG 
CCATCTCTCG GCTACCTTAT TTTGGCCAAT ATCATGGTGA GAGAAAAGCA CAATGTGGTG 
ATCACGACCA ATTTCGACAA TCTTTTGGAG GATGCCATTC GTACTTATAC AAAGGAAAAA 
CCCTTCATCG CCGGTCACGA GGCTTTGGCC GATTATGTGC CCAAACGCAG TGATAGGCCT 
ATTATTCTGA AGCTCCATCG GGATTTGTTC TTACAGCCCT TTTCCGATCA GTTGAATACG 
GATATTTTAC AGGCGGCTTG GGAATCCATA TTAGGAAAAT TCCTTTCGGA CTATCACCTG 
ATTGTACTCG GTTATGGCGG AAATGATGGG AGTTTGATGA ATTATTTACT CAAGCTCAAA 
AATAGAAAGC CTATTTATTG GTGTGTTCGT AATACGGATA AGGCTACATC AAAATCCTTA 
TGGAACACTC TATCACCTAA GGCTAAAAGG CTGCTCAAGA ATGACGGCTA CCTCGTCCCG 
ATAGATGATT TTGACAGGTT CATGTACGAT TGTTACGCGG CATTGGGCTA TAAGTTCCTT 
GAGGGGATAG AAAAGATAGA GAAACCGAAA TCGATACATG AAATCCTAAA GCCGAATTAT 
GCGCGAATCG AAAGTATCCA AACACAGTTG AGACAACTTT CGCAAACGGA AGAAGAATTG 
TCGAAAGAAA GTTTTCAATC GATCAAAAGC TTTTTGCCTG ATTCTTGGAT GTGGATACTG 
AAGGCCAATC AAGAGAAGGA TATAGACAAG AAAGACAAGA TCTACCGAGA AGGTATTGCC 
AAGTATCCTC AAGATGCGAA TCTATTGGGA GATTATGCCG ATTTCTTATG TGATATCTGT 
CATGATTACG ACAGAGCCGA GGCGTATTAC AAGCGAGCAT TAGAGGCCGA TCCGAATCAT 
GCGAATACTC TTGGCAATTA TGCTTTATTC TTAAAGGATG TCCGTCACGA TTACGACCAA 
GCCGAGGCAT ATTACAAGCG AGCATTAGCG GCGGATCCGA ATCATGCGAA TAATCTTGGG 
AATTATGCCA ATTTCTTATA TAATATTCGT TGCGATTACG ACCAAGCCGA GACGTATTAC 
AAGAAAGCAT TAGAGGCAGA TCCGAATCAT GCGAATACTC TTGGGAATTA TGCCAATTTC 
TTATGTGATA TTCGTCACGA TTACGACCAA GCCGAGGGGT ATTACAAGAA GGCATTAGAG 
GCAGATCCGA AGAACGCAAT TACTCTTGGC AATTATGCCT TATTCTTAAA TGATATTCGT 
CACGCTTACG ACCAAGCCGA GGCGTATTAC AAGCGAGCAT TAGAGGTAGA TCCGAAGAGT 
GCCAATAAGC TTGGCAATTA TGCTCATTTT CTCATTACGT GTCGGGGGGA TTTCAAACGT 
GCTGATAGCT TGATTCAGCA AGCATTCGAG AATGCCGATA ATGACGAAGA GACGAAACCC 
TTGCAGGCCA AGTTATGGTT CTACAGGTAT GCGCACTATT ACGAGGAATG GGGAGCCGAG 
GCGGAAAAAG AGCTGGCGGC TTTGCTGAAT GTCGGAGCGA AATCCATCGG CTGGAACTTG 
GCCCCGGATA TAGAGCTGGC TCGGAAAAAC AAGCATCCGC ATATAGAGCA GGTCGAAGCC 
TTTGCCAAGG CATTGACAGA GAAAGCACAG TAG 

 

Protein sequence

MEGSQQTITS KQLVRMLKDA SRGSKGKGSG EMKFCFLIGA GASISSGIPS GAKLAWDWLQ 
QIKEDCDGED FEDWKIEIKM PDQHIEERVG EFYPEIYEKR FGHAPETGYD YIRGLMEGRE 
PSLGYLILAN IMVREKHNVV ITTNFDNLLE DAIRTYTKEK PFIAGHEALA DYVPKRSDRP 
IILKLHRDLF LQPFSDQLNT DILQAAWESI LGKFLSDYHL IVLGYGGNDG SLMNYLLKLK 
NRKPIYWCVR NTDKATSKSL WNTLSPKAKR LLKNDGYLVP IDDFDRFMYD CYAALGYKFL 
EGIEKIEKPK SIHEILKPNY ARIESIQTQL RQLSQTEEEL SKESFQSIKS FLPDSWMWIL 
KANQEKDIDK KDKIYREGIA KYPQDANLLG DYADFLCDIC HDYDRAEAYY KRALEADPNH 
ANTLGNYALF LKDVRHDYDQ AEAYYKRALA ADPNHANNLG NYANFLYNIR CDYDQAETYY 
KKALEADPNH ANTLGNYANF LCDIRHDYDQ AEGYYKKALE ADPKNAITLG NYALFLNDIR 
HAYDQAEAYY KRALEVDPKS ANKLGNYAHF LITCRGDFKR ADSLIQQAFE NADNDEETKP 
LQAKLWFYRY AHYYEEWGAE AEKELAALLN VGAKSIGWNL APDIELARKN KHPHIEQVEA 
FAKALTEKAQ