Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG1001 |
Symbol | |
ID | 2553031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 1058370 |
End bp | 1058906 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637149709 |
Product | hypothetical protein |
Protein accession | NP_905224 |
Protein GI | 34540745 |
COG category | [S] Function unknown |
COG ID | [COG4283] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGAG CAACGACGAA ACAGGATTTG ATCATGGCTT CCAATGGGCA ATTCGAGAAG CTGTGGGTAC TTATTGACGG AATGAGCGAT GATCTGCAGA ATGCGACATT TGCCGACCAA ATGGCTACAG CCGGCAAGGA AGCACATTGG GGTCGGGACA AAAACCTCCG CGATGTACTC GTGCATCTGT ACGAGTGGCA CCAACTCTTG CTGAATTGGA TCAACTCCAA CAGTAAGGGC GAACGCAAGC CTTTTCTGCC TGAACCCTAT AACTGGAAGA CTTATTCGGT GATGAACGTG GAGTTTTGGA AGAAACACCA ACAGACGCCA TTGGCAGAAG CAAAGGACAA ATTGAAAGAA AGCCATCGAC AAGTAATGGC ATTGATCGAG ACATTTTCGA ACGATGAATT ATTTGCCAAG GGAGTATTCG ACTGGACGGA TACTTCGACT CTCGGTGCAT ACTGCGTATC AGCCACTTCC AGTCATTACG ACTGGGCGAT GAAGAAAATA AAGCTACATA TCAAGACCGG TAAGTGA
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Protein sequence | MARATTKQDL IMASNGQFEK LWVLIDGMSD DLQNATFADQ MATAGKEAHW GRDKNLRDVL VHLYEWHQLL LNWINSNSKG ERKPFLPEPY NWKTYSVMNV EFWKKHQQTP LAEAKDKLKE SHRQVMALIE TFSNDELFAK GVFDWTDTST LGAYCVSATS SHYDWAMKKI KLHIKTGK
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