Gene PG1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG1001 
Symbol 
ID2553031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp1058370 
End bp1058906 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content47% 
IMG OID637149709 
Producthypothetical protein 
Protein accessionNP_905224 
Protein GI34540745 
COG category[S] Function unknown 
COG ID[COG4283] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGAG CAACGACGAA ACAGGATTTG ATCATGGCTT CCAATGGGCA ATTCGAGAAG 
CTGTGGGTAC TTATTGACGG AATGAGCGAT GATCTGCAGA ATGCGACATT TGCCGACCAA
ATGGCTACAG CCGGCAAGGA AGCACATTGG GGTCGGGACA AAAACCTCCG CGATGTACTC
GTGCATCTGT ACGAGTGGCA CCAACTCTTG CTGAATTGGA TCAACTCCAA CAGTAAGGGC
GAACGCAAGC CTTTTCTGCC TGAACCCTAT AACTGGAAGA CTTATTCGGT GATGAACGTG
GAGTTTTGGA AGAAACACCA ACAGACGCCA TTGGCAGAAG CAAAGGACAA ATTGAAAGAA
AGCCATCGAC AAGTAATGGC ATTGATCGAG ACATTTTCGA ACGATGAATT ATTTGCCAAG
GGAGTATTCG ACTGGACGGA TACTTCGACT CTCGGTGCAT ACTGCGTATC AGCCACTTCC
AGTCATTACG ACTGGGCGAT GAAGAAAATA AAGCTACATA TCAAGACCGG TAAGTGA
 
Protein sequence
MARATTKQDL IMASNGQFEK LWVLIDGMSD DLQNATFADQ MATAGKEAHW GRDKNLRDVL 
VHLYEWHQLL LNWINSNSKG ERKPFLPEPY NWKTYSVMNV EFWKKHQQTP LAEAKDKLKE
SHRQVMALIE TFSNDELFAK GVFDWTDTST LGAYCVSATS SHYDWAMKKI KLHIKTGK