| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0958 |
|---|
| Symbol | |
|---|
| ID | 2552984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 1018225 |
|---|
| End bp | 1019460 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637149672 |
|---|
| Product | ribonuclease BN, putative |
|---|
| Protein accession | NP_905189 |
|---|
| Protein GI | 34540710 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.107096 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAATT CTTTCAAATC TGTTTTCCTC ACGATCCGCT ACTTTATCCA AAATGATCTG
GCTACACAGG CATCTGCTCT CACTTACCGT ACGATCCTCT CCATCGTACC GATGCTTGCC
GTCCTGATCG GTATTGCCAA GGGTTTCGGT ATTCAGCAGG TGGTACATGA TTGGCTCAAA
GAATATCTCC CTGGTCATCA GCAGGAGTTG GAACAGGCAT TAGGCTATGT GGAAAACTAT
CTGGCACAAG TGCAAGGCGG TATCTTCGTC GGTGTCGGTC TTATCGTACT GCTCTACACG
GTCTTTTCTT TGATTGCCAC TGTGGAAGAC ACCTTTACCG ATATTTGGCA AACCAATAAA
AGACGCACTT GGAAACGGAG GGTAATCGAT TATATGGGAG CTTTTTTCCT GTTGCCAATC
CTGATCACGG CATCCAGTGG TCTCACCCTA ATGATGACTA CGATCAAGGG AACATACTTC
AGCGAATATA TCCTCTTCGG CCCTATGCTG GAGTTGATCC TGAATCTGAT ACCTTACGTG
ATTATCGTTC TACTTTTTAC CGGTATGTAT ATCGTATTAC CCACAGTAAA CGTCCGGTTT
TGGCCGGCAT TTATTTCTGG AGTGCTGGCC GGTATCGTTT TCCAGATATT CCAAGCTCTT
TATATCAGTG GTATCCTTTG GATCTCGAAA TACAATGCCA TATACGGTAG CTTCGCTGCA
GTACCCCTTT TGCTCCTTTG GATACAGCTC TCATGGACTA TTGTTCTGTT CGGAGCACAA
CTGAGTTTCT CCATTCAGAA TGTCAGGAAA TTTGCTTTTG AGAGGGATAC GACCAATGTT
TCGCGCCGTT ATATCGATTT CATAACAATC GTTGTAGCCT CATTGATCGT TAAGCGTTTC
ATATCGGACG AACGCCGCCC CCATACAGCG GATTCGCTTG CAGAAGAAAG CAAAGCTCCG
ATCCGATTAG TGTCAGAAGC CATACACCGC CTGCTTTCCA TCGAAGCCAT AACGGAAGTG
AATTATGCAC ACGATCCCAA GGCCGAATTT TTCAGTCCAG CGATAGATCC CGAGAAAATA
ACGGTGGGCT TCATTCTCGA TCGTATAGAT CGTTATGGGA GCGAACACTT CAAGGTAGAC
AATAAGGTCC GATTCGCTCC CGAATGGCAA GCGATAGAGG ATTCCCGTCA GAGCCTGCAC
ATCCCCCCTG CGGACACGCT ACTAAAGAAT TTGTAG
|
|---|
| Protein sequence | MINSFKSVFL TIRYFIQNDL ATQASALTYR TILSIVPMLA VLIGIAKGFG IQQVVHDWLK
EYLPGHQQEL EQALGYVENY LAQVQGGIFV GVGLIVLLYT VFSLIATVED TFTDIWQTNK
RRTWKRRVID YMGAFFLLPI LITASSGLTL MMTTIKGTYF SEYILFGPML ELILNLIPYV
IIVLLFTGMY IVLPTVNVRF WPAFISGVLA GIVFQIFQAL YISGILWISK YNAIYGSFAA
VPLLLLWIQL SWTIVLFGAQ LSFSIQNVRK FAFERDTTNV SRRYIDFITI VVASLIVKRF
ISDERRPHTA DSLAEESKAP IRLVSEAIHR LLSIEAITEV NYAHDPKAEF FSPAIDPEKI
TVGFILDRID RYGSEHFKVD NKVRFAPEWQ AIEDSRQSLH IPPADTLLKN L
|
|---|
| |