| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0952 |
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| Symbol | ispG |
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| ID | 2552973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 1011062 |
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| End bp | 1012807 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637149666 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | NP_905183 |
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| Protein GI | 34540704 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.182684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATC TGTTCGGATA TAAAAGACGC AAGACATCCG TAGCTCAAAT AGGTGATACA
CCTCTCGGCG GAGATTTTCC CATTCGCATA CAATCTATGG CCAATGTGTC CACCATGGAC
ACACAGGCAT CTGTCGATCA GGCAGCTCGA ATTATAGATG CAGGGGCTGA TTATGTCCGT
TTTACGGCTC AGGGTGTACG TGAAGCCGTC AATCTTCAGC ATATCCATGC CGGGCTATGC
CGTTTGGGCT ATCACATACC ATTGGTAGCG GATATTCACT TTAGTCCCAA AGCTGCAGAA
GAAGCTCTGT TGCATGTGGA GAAGGTGCGC ATCAATCCGG GCAATTTCGT CGAGATGAAG
TCCGGGGGCA ATCTGACTGA AGAGGAAGCT TTCGATCTGG GACATAAAGC TGTGAGAGAA
CGTTTCGGCT CTTTCGTGGA AGATGCCAAA CGATTAGGGC GAGCCATCCG CATCGGAGTC
AATCATGGCT CTCTGTCCGA ACGTATGCTT ACGCGCTATG GCGATACGGC TGAAGGCATG
GTACAAAGCT GCATGGAATA CCTCGATGTA TGCCACGAAC ATGAGTTCGA CGATGTGGTG
ATCTCGATGA AAGCATCGAA TACTTTGGTC ATGACAGCAG CTGTACGCCT TCTTGTGGAA
CGAATGGATG CTGCAGACAT GCACTATCCG CTTCACATCG GTGTCACCGA GGCTGGCGAT
GGTGAGGACG GGCGGATCAA GAGTGCTGTC GGCATAGGTT CGCTTTTGGC TGATGGCATT
GGCGATACCA TTCGTGTTTC ACTGAGTGAG GATCCGGAGC ATGAGATTCC GGTAGCCCGC
AAATTGCTTG CCTATATAGA GAAACGTAAC GGCCACCCGT CGGTAGCTGT TCCTCAACCA
GATCGTTACG ATCGGGATAA ACTCCGGCGC CAAGAAACAT ATGCTGTCGG AGACTTTATC
GGAAGTAAGC ACATTCCGAT TGTCATATCG GACCGCAGAC AGGGAGATGA TCATTTCGAT
ACCGAACTCT TGCCTGACAT CGTACTCGGG GCCGATGGTC GGTATTATCG TGAGGATATG
CTGCTGGAAA ATATCGTTTT TCGTTCCATC CGACAGGATG ATCTGACTGA CGATTGTCTA
CAGACTATTG AAGCAATCTC TGACACAGTT ATTATCCTTG AATCCGTGGG TATCAATCCC
GTAGCTGAAT GGCGTGCAAT GCTTCATCGT TTGGAGCTGG CAGGATGTCG ATGTCCTGTC
ATCCTGCACC GCAGGTATGA CTGCACCGAT TTGGAAGATC TTCAGCTACA AGCGTCGGCT
GACATGGGGG CTATACTTCT TGAAGGGCGA GGCAATGGGC TTATGATTAC TGCAGACAAA
CTGCCCTCGG TCGCTGTGAA TCACTTGGCT TTCGGTATTT TACAAGCTAC AAGGTTACGT
ATGAGTCGGA CGGAATATAT CAGCTGCCCG AGCTGTGGCC GTACATTGTA CAATTTGCAA
GAAACCGTAG CTCGAATCAA AGCTGCAACT GCACATCTAA AAGAATTGAA GATCGGCATT
ATGGGCTGTA TCGTCAATGG GCCGGGTGAA ATGGCCGATG CCGACTATGG CTACGTAGGG
GCGGGTCCGG GACGAATCGA TCTGTATAAA CAGAAGATAT GTGTTCGTCG TGGTATTCCT
CAGGAGCAGG CCGTACAACA GCTTATCGAA CTCATCAAAG AAAACGGAGA CTGGAAAGAG
CGTTAG
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| Protein sequence | MLDLFGYKRR KTSVAQIGDT PLGGDFPIRI QSMANVSTMD TQASVDQAAR IIDAGADYVR
FTAQGVREAV NLQHIHAGLC RLGYHIPLVA DIHFSPKAAE EALLHVEKVR INPGNFVEMK
SGGNLTEEEA FDLGHKAVRE RFGSFVEDAK RLGRAIRIGV NHGSLSERML TRYGDTAEGM
VQSCMEYLDV CHEHEFDDVV ISMKASNTLV MTAAVRLLVE RMDAADMHYP LHIGVTEAGD
GEDGRIKSAV GIGSLLADGI GDTIRVSLSE DPEHEIPVAR KLLAYIEKRN GHPSVAVPQP
DRYDRDKLRR QETYAVGDFI GSKHIPIVIS DRRQGDDHFD TELLPDIVLG ADGRYYREDM
LLENIVFRSI RQDDLTDDCL QTIEAISDTV IILESVGINP VAEWRAMLHR LELAGCRCPV
ILHRRYDCTD LEDLQLQASA DMGAILLEGR GNGLMITADK LPSVAVNHLA FGILQATRLR
MSRTEYISCP SCGRTLYNLQ ETVARIKAAT AHLKELKIGI MGCIVNGPGE MADADYGYVG
AGPGRIDLYK QKICVRRGIP QEQAVQQLIE LIKENGDWKE R
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