| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0938 |
|---|
| Symbol | |
|---|
| ID | 2552954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 997284 |
|---|
| End bp | 1000475 |
|---|
| Gene Length | 3192 bp |
|---|
| Protein Length | 1063 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637149656 |
|---|
| Product | calcium-transporting ATPase |
|---|
| Protein accession | NP_905173 |
|---|
| Protein GI | 34540694 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0474] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0829843 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGCAG CTCCTCAAGG GGGGATTTAC AACTACTTTC ACTCCTTACT GCCACCCCTT
TCCCTCGCTC CTTTTTTGCC AAGAACTCCT CTTCCCTCCA CCTCCTTATT TTGCAAAGGT
CTCAAAAAGG AGAGATACAA GCCACGGTTT CGGCCGCGGG AATGCCATTG TTCGGTGGAG
AATCTGCATC TCGGCCATGA AATGCAGAAT TCCCACCGGA CAATCTGCAA ATCGGCACTG
CAATTACTTC CTCCAAGTTG GAGCGACCCT TTTCGGCGAC GAGATGCAGA TTTTCCACCG
AACAGCCCTT CTCCCGCTCG GCCATCGTCC GAAAACGCAA GCAATCGTGC TAAAGAAAAA
GTACATTTGT CTCCGATTAT CGCACTCTGC ATTTCGCATC ATACGAGTCA AGAAAAACTT
TTTACACAAC ACCTGATGAA TATGCCCACC GGGGAAACCC ACAAGTCTCC CCCTTCTTCC
TCGCATCGAG GACTGTCCGA TGCCGAAGTC TTACATAGCC GAGCTACCCA CGGCTCGAAC
GAACTGACTC CCCGCGAGCG CGAATCGCTC TGGAGCAAGT TTTTCGAGAA GTTCAAAGAT
CCCATCATCA TCATCCTGCT CGTGGCCATG GTGCTTTCGT TTGCCGTGGC TTGCTATCAC
TACTTCACGG GCGGAGAGGG CGTCTCCGTC TTTCTGGAGC CGACAGGGGT GCTGCTCGCT
GTCGTATTGG CCACGGGAGT AGCCTTTTTC TTCGAGATGA AATCCGAGAA AGAGTTCGAG
ATCCTGAATC AGGTCAATGA AGACATATTA TATAAGGTAT ATCGCAACGG CATGATCTGC
AGGGTGCTCA AAAAAGAAAT CGTCGTAGGC GACCTGGTCG TTCTGGAAAC GGGAGAGCAA
ATTCCGGCCG ACGGCCGACT CATCGAAGCC ATCTCGCTAC AGATCGACGA ATCCAGCCTG
ACGGGCGAAC CCGTTGTAAA CAAAACCACT GACCGGCAGG ACTTCGACGC GGAAGCCACC
TACCCCTCCG ATTACATCTG CCGAGGCACC ACCATTCTGG ACGGCCACTG CACTTTCAGG
GTGGAAAAGG TGGGCGACGC CACGGAATAC GGACGGGTAT TCGAGGGTGC CCGACCAGAC
AACAGCGTAC AGACGCCCCT GAACAGACAG CTCGACCATC TGGCCGGCCT GATCACGAAC
GTCAGCTATA GCATAGCAGC CTTGGTACTC ATCGGTAGCA TCATCATGTA CGCCGCCAAC
GGCGGATTCT TCCCCTTCGA CTGGGCGTAT GCCCTCTCCT TTTTCCTCAA TAAGATCATG
ATAGCCGTCA CGGTCATCGT CGTAGCCGTC CCCGAGGGAT TGCCCATGAG CGTGACGCTG
AGTCTGGCCT ACAGCATGCG CAGCATGATG AAGACCAACA ATCTAGTACG AAAGATGCAT
GCTTGCGAAA CCATGGGGGC AGCTACCGTC ATCTGCACGG ACAAGACGGG AACCCTGACA
CAGAATCGCA TGGCCGTGGC AGACACATAC TTCGAGCCAG AGCATGAGGC AGATTCTTCG
CTTCTGGCCG AAGCCATGGC CGCCAACTCC ACAGCCTATC TGGACTGCTC GGACGAAAAG
TCGATACGTC CCCTCGGCAA CCCCACCGAA GGAGCCTTGC TCCTATGGCT CAGAGAGAGG
GGAATAAACT ATCTGACCGT GCGCGAAGCC TGCCCCCTAC TCCTGCAACT GACCTTCTCC
ACCGAGCGCA AATACATGGC CACGGTAGTC CGATCGGCTT CCCTCGGCAA GCCTGTACTC
TGGGTCAAAG GCGCACCGGA GATCGTGCTC GGCTTCTGCT CCTTGCCCGA TGAAGAAAAA
TTCGACTCCT ATACCCGAAA GCTCGCCGAA TATCAGGGCA AGGCAATGCG TACCATCGGA
TTTGCATACA AGGAGCTGTC CTCCGACAAG GAGCAGGTAT TTGCCAATGG GCGTCTCCAC
GTGCATGACC TCCGCTTCAT GGGTATAGTC GGCATAGCCG ATCCCATTCG CTCCGACGTT
CCCGAAGCGA TCAGCGACTG TATGAAGGCC GGCATTCAGG TGAAAATCGT AACGGGCGAT
ACACCGGGTA CCGCCCGGGA GATCGGTCGC CAAATAGGGC TGTGGGACGA AAGCTGTACG
GAGCGGAATA TGATCACCGG GTCGGATTTC GCAGCCCTAA CCGACGAGGA ACTGCGCCCT
CGGATAGGCG AACTGCGTAT CATGTCCCGC GCTCGTCCGA TGGACAAGGA AAGGCTTGTA
CGCCTGCTGC AGGAAGCTCA CGAAGTGGTG GCCGTGACGG GCGACGGCAC GAACGACGCT
CCTGCACTCA ACCGCGCACA GGTGGGCCTC TCGATGGGCG ATGGCACTGC CGTAGCCAAA
GAGGCGAGCG ACATCACCAT TCTGGACAAT TCTTTCAGCA GCATTGCCAA AGCCGTTATG
TGGGGACGAT CGCTTTATCG GAATATCCGC CGTTTTATCC TCTTTCAGAT GACCATCAAC
GTCGTGGCCT GTATCATCGT TCTGATCGGC GCATTTGTGG GTACGGAGTC GCCCCTTACC
GTGACGCAAA TGCTGTGGGT CAATCTCATC ATGGACACTT TCGCCGCCTT GTCCTTGGCT
TCGCTCCCTC CCGACAAGGG TGTGATGAAG GAGCAACCCC GCCGGCAGGA CGATGCCATC
ATCAACCCGC TGATGGCACG ACGAATTTTC GGGCTTGGCG GAGGATTCGT TTTGCTGCTC
TTCAGCCTGA TCCAATACTT CAAACATGCC GAACTCAACA GCATGATGGA CTTCCACCTC
GGTGCATGGG CTACTACCCT TTTCGACTTC CGGCCTGTAG AGAATGCCCT TTCCGACTTT
GAGCTGAGTG CATTCTTCTC CATATTCGTT TTCCTCCAAT TCTGGAATAT GTTCAACGCC
AAAGCATTTA TGACAGGGCG GAGTGCCCTG CACCGGCTGT GGAAATGTCG CAACTTCGTC
CTCATCGCCC TGCTGATTCT TATAGGACAA ATCATCATCA CGACTTTTGG CGGAGGCATG
TTCCGCGTAG TACCCCTTGC CCCGATGGAC TGGATTCTCA TCATCCTCGC GACGAGTCTG
ATCCTCTGGT TGCACGAATT GGAACGCATA TTGCCTACTT TTGCAAATCA TCTTATTCAT
AATCGACAAT AA
|
|---|
| Protein sequence | MQAAPQGGIY NYFHSLLPPL SLAPFLPRTP LPSTSLFCKG LKKERYKPRF RPRECHCSVE
NLHLGHEMQN SHRTICKSAL QLLPPSWSDP FRRRDADFPP NSPSPARPSS ENASNRAKEK
VHLSPIIALC ISHHTSQEKL FTQHLMNMPT GETHKSPPSS SHRGLSDAEV LHSRATHGSN
ELTPRERESL WSKFFEKFKD PIIIILLVAM VLSFAVACYH YFTGGEGVSV FLEPTGVLLA
VVLATGVAFF FEMKSEKEFE ILNQVNEDIL YKVYRNGMIC RVLKKEIVVG DLVVLETGEQ
IPADGRLIEA ISLQIDESSL TGEPVVNKTT DRQDFDAEAT YPSDYICRGT TILDGHCTFR
VEKVGDATEY GRVFEGARPD NSVQTPLNRQ LDHLAGLITN VSYSIAALVL IGSIIMYAAN
GGFFPFDWAY ALSFFLNKIM IAVTVIVVAV PEGLPMSVTL SLAYSMRSMM KTNNLVRKMH
ACETMGAATV ICTDKTGTLT QNRMAVADTY FEPEHEADSS LLAEAMAANS TAYLDCSDEK
SIRPLGNPTE GALLLWLRER GINYLTVREA CPLLLQLTFS TERKYMATVV RSASLGKPVL
WVKGAPEIVL GFCSLPDEEK FDSYTRKLAE YQGKAMRTIG FAYKELSSDK EQVFANGRLH
VHDLRFMGIV GIADPIRSDV PEAISDCMKA GIQVKIVTGD TPGTAREIGR QIGLWDESCT
ERNMITGSDF AALTDEELRP RIGELRIMSR ARPMDKERLV RLLQEAHEVV AVTGDGTNDA
PALNRAQVGL SMGDGTAVAK EASDITILDN SFSSIAKAVM WGRSLYRNIR RFILFQMTIN
VVACIIVLIG AFVGTESPLT VTQMLWVNLI MDTFAALSLA SLPPDKGVMK EQPRRQDDAI
INPLMARRIF GLGGGFVLLL FSLIQYFKHA ELNSMMDFHL GAWATTLFDF RPVENALSDF
ELSAFFSIFV FLQFWNMFNA KAFMTGRSAL HRLWKCRNFV LIALLILIGQ IIITTFGGGM
FRVVPLAPMD WILIILATSL ILWLHELERI LPTFANHLIH NRQ
|
|---|
| |