Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0896 |
Symbol | lacZ-2 |
ID | 2552047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 957389 |
End bp | 960442 |
Gene Length | 3054 bp |
Protein Length | 1017 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637149621 |
Product | beta-galactosidase |
Protein accession | NP_905139 |
Protein GI | 34540660 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTTGGCG AAAACAAAGA AGACGGCCAT GCTACCTTTA TGCCCTATGC TACAACAGCA TTGTTGCAGG CTGATGAGCG GTATCAGAAA CCTTGGCTTA CTCCTTCGCA GGCAGAATTT TTATCTCTGA ACGGCTTGTG GTATTTTCGC TATTTTCCCG ATGCCCGTAC TGCCCGTACC GATTTTGTCG AAGATCTGTT CGATGTGTCT GCATGGGATA CCATCACAGT ACCATCGTGC TGGCAGATGA AAGGTTGGGA TACACCTTTA TATATCAATG TAAACCACAT CTTTGAGGAC AATCCTCCAT TTATTCGCAT TCAGAAGACT TATACCTCGG CAGTGGATCC CAATCCGACA GGCTCTTATC GGCGTGACTT TATCCTTCCG ACAGGCTGGG AAAAGAAACG CGTTTATCTG CATTTCGATG GTCTCTATAG TGGGGCTTAT GTATGGATAA ACGGGCGTTA TATCGGCTAC ACTCAAGGGG GCAATAACGA TGCCGAGTTC GATATCAGTG CGGCAGTTCG TGCGGGACAG AACAATGTGA GCATACAAGT AGTCCGCTGG ACGGATGCTT CTTATTTGGA GGGACAGGAT ATGTTCCATA TGAGCGGATT GCATCGCGAT GTCTATCTGT ACGCCACGCC TCGTACTTCC ATTCGGGATC ATTACATAAC GAGCAAGTTG CATCCCGAAT CCGACTATAC CACAGGGGAA ATATCCGTAG CCGTCGAGAT GGACAACAGA GACGGTTCGG CTGCACGTAA GACTGTCGGA ATACGTCTCT TGGATCCCCA AGGGAAAGTG CTCTGGGAGG AACGGAAGCA AACCCGACTG TCTGTGGGAG AACAGAAACA AAGCCTTCAT TTTCGGAAAG CCGATCTTCG CAATCTATCC CTGTGGACAG CCGAGACACC TACTCTTTAT ACTCTTATTA TCACCCAATG GGATGATAAG GAGCGCGAAG AATTGGCTTT TGCCACCAAG TATGGATTCC GTCAGCCGGA AATTCGCGAT CAATCGGTGT ATCTGAACGG TCGTAAAGTA CTGTTCAAAG GAGTCAATAC GCAGGATACG CATCCGCTTC ATGGCCGCAG CATCGACTTG CCGACAATGG TGAAGGACAT AACGATGATG AAGCAGGCCA ACGTCAATAC TCTTCGAACG AGTCACTATC CACGACAGCC CAAGATGTAT GCCCTTTGTG ATTACTACGG TCTCTATGTC ATGGACGAAG CCGATTTGGA ATGTCATAAG AATTGGGATG ACCATGGAGA GAAGGGTGGT ATCACCAATG CCGAATCATG GCGGGCGCAA TATGTGGATC GCACTGTCCG TATGGTCTGT CGCGATCGCA ATCATCCCTC CGTTTTGTTT TGGTCGCTCG GCAATGAATC GGGTGGGGGA GAAAACTTCC GACATACCTA TGCGGCGGTT CGTGCACTCG ATTCGCGCAT CATTCACTAC GAGGGTGCTA CCCGTGGCGG AACGGAATAT ACCGACCTGC ATTCCGTTAT GTATCCCTCC CTTGCTCAGG TACAGGCCGG ATCCAATGGC CGGGAGACGG ACGGAAAGCC CTATTTCATG TGCGAATATG CTCATGCCAT GGGCAACGGT GTCGGCAATT TGCAGGACTA TTGGGATATA ATGGAGCAGA GCAGTGCCGG TATAGGCGGC TGTATATGGG ACTGGGTGGA TCAGGCCATC TACGATCCTT CCGAAATCAA ACGTGGACTC TATCGCCTGC ATACCGGATA CGACTATCCG GGACCTCATC AGGGAAATTT CGTGAACAAC GGACTTGTGA CGGCTGACCG GTCATGGACT CCGAAGCTGT ACGAAGTGAA GAAAGTGTAT CAGTACGTGA AATTCGATGC ATACGACAGT AAAAGCAAAC TGCTCACTCT GCACAATGCC TACTCCTTTA CGGATTTGAA TCGATTCGGT CTTCGTTTTA AGCTCCTCTC CGACGGCTGT GTGATCGAAA GCGGAGAAGT GGATCTGCCC AAATTGCCGG CAGGAGAAAA AGCTACATTG AGGATACCCG TCGCCGATAT TCCAATGTAT TCGACTCGCG ACTTCCATAT CGATTTCGAA CTCTTCCTTC GTGAAGCCAC CACTTGGTCC GATAAGGGAT ACACGGTAGC ATCCGAACAG TTTACACTTG CACAAAGAGA GGGTTTTGCT TCCCTCCTGC CTGAGCGGAT GCCCACGCTG CAAGTAACGA CGGAAGGGAA TCATCTTCAT ATCGCTAACG ACAGGGTGCA GCTCGTATTC GATCTCCATA CGGCAGAACT TATTTGTTGG AACTATGGCA GCCACCCTGT GATTATCCCG AGGGGAGGCC CTGTCTATGA CAATTTCCGT TGGGTAGAGA ACGACTCCCC CTACGGAAGT ATTCCTCCCG GAGCACCGGC CGGTCCGGTA CAGCCTGCTG TTCCTTCCTA CGAGGTCAAT GCAGATTCCA CACGGGTGAT CCTCGCGGCG TCGCATCGTG CTCTCTGCCC TTATCGCCTT AACTATTATA TATATGGAGA CGGTACGGTG GATATTCGCG CAGACTTTAC ACCCGAGGAA GAGCACGCGG ATAAGTTACG TAGACTTGGG ATTAAAATGT GCCTGCCCCT GCAGATGGAT CGAATCGAAT ATCTGGCACG AGGCCCTCAT GAGAATTATG TGGATCGTAG GCAGAGTGCT TTCTTCGGAC TGTATTCCGA CCGTGTGAGC CGTATGGTCG AACCCTATGT ACGCCCCCAG AGTACGGGCA ATAGAACCGG CCTTAGAGCT CTGACCCTGA CGGATGATTC CGGCAGGGGT ATCAGGGTGG AAGCTTCGGG ACAGGTCGAT TTCTCCATTC TTCCCTATGA GGACGAACAT CTTGCGCGGA CTCGTCATCA ATGGGAATTA CCCATGCCTG CGCATCATAT CTTGCGCTTC GACTATATGC AGCGCGGACT GGGCAATGGA AGTTGCGGGC CCGGTACTGC TCCGACATAC CTTTGCCCCT CATCGGGCAC TTATTCCTTC GAACTTCGTT TTCGTCCTCT CTGA
|
Protein sequence | MFGENKEDGH ATFMPYATTA LLQADERYQK PWLTPSQAEF LSLNGLWYFR YFPDARTART DFVEDLFDVS AWDTITVPSC WQMKGWDTPL YINVNHIFED NPPFIRIQKT YTSAVDPNPT GSYRRDFILP TGWEKKRVYL HFDGLYSGAY VWINGRYIGY TQGGNNDAEF DISAAVRAGQ NNVSIQVVRW TDASYLEGQD MFHMSGLHRD VYLYATPRTS IRDHYITSKL HPESDYTTGE ISVAVEMDNR DGSAARKTVG IRLLDPQGKV LWEERKQTRL SVGEQKQSLH FRKADLRNLS LWTAETPTLY TLIITQWDDK EREELAFATK YGFRQPEIRD QSVYLNGRKV LFKGVNTQDT HPLHGRSIDL PTMVKDITMM KQANVNTLRT SHYPRQPKMY ALCDYYGLYV MDEADLECHK NWDDHGEKGG ITNAESWRAQ YVDRTVRMVC RDRNHPSVLF WSLGNESGGG ENFRHTYAAV RALDSRIIHY EGATRGGTEY TDLHSVMYPS LAQVQAGSNG RETDGKPYFM CEYAHAMGNG VGNLQDYWDI MEQSSAGIGG CIWDWVDQAI YDPSEIKRGL YRLHTGYDYP GPHQGNFVNN GLVTADRSWT PKLYEVKKVY QYVKFDAYDS KSKLLTLHNA YSFTDLNRFG LRFKLLSDGC VIESGEVDLP KLPAGEKATL RIPVADIPMY STRDFHIDFE LFLREATTWS DKGYTVASEQ FTLAQREGFA SLLPERMPTL QVTTEGNHLH IANDRVQLVF DLHTAELICW NYGSHPVIIP RGGPVYDNFR WVENDSPYGS IPPGAPAGPV QPAVPSYEVN ADSTRVILAA SHRALCPYRL NYYIYGDGTV DIRADFTPEE EHADKLRRLG IKMCLPLQMD RIEYLARGPH ENYVDRRQSA FFGLYSDRVS RMVEPYVRPQ STGNRTGLRA LTLTDDSGRG IRVEASGQVD FSILPYEDEH LARTRHQWEL PMPAHHILRF DYMQRGLGNG SCGPGTAPTY LCPSSGTYSF ELRFRPL
|
| |