| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0875 |
|---|
| Symbol | |
|---|
| ID | 2552904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 938192 |
|---|
| End bp | 939094 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637149604 |
|---|
| Product | mobilizable transposon, TnpA protein |
|---|
| Protein accession | NP_905123 |
|---|
| Protein GI | 34540644 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.121236 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGA GCAAAATTCC AATAAAAAAA GTGTGTGAGC ATTGCAAACA GGAGTTTATA
GCTTTGAAGA CGACTACCAA GTATTGCTCA CATAGATGTA ATAGCAGAGC CTACAAAGCT
CAAAAAAGAG AAGAGAGGGT ACGCAGAACA GAACTTTCTG AACAAGAGAA AAAGGTCAGT
GATATTATAG ACAAACCTTA TCTCTCCATC TCAGAAGCTG GGCGATTACT TGGTATTAGT
AGGCATACAA TATATAGATA TATCTACTCA GGGAACTTAA AGGCTTATAA TTTGAGTTCT
CAACGCTCAA TCGTCAAGCG TGAAGACATT GAACGGATGT TGGCAGAGCG ACCTTATGAG
AAACGACAGC CCAGAGATGC AATCGTAATT ACGGAACTAT ATACGACAGA CGAGGTGTGC
GATATCCACA ACATATCTCG ATCTTCTCTT TTTGCAATAG CCAAGCGAGA GAATATCCCT
CGAACTTATA ACAGAGGCAA GACCTATTGG AGCAAACGGC ATATAGATGC CTATTTTGCT
AAACAGGCTC CTGCTTCTCA TATCGAAGAA TGGTGTACAG CCGTGGAGAT ACAAGAAAGA
TTCGATATGA CGCTCACAGC CGTTTACAAC TTCATCTCTG ATCACAACAT CCCCAGAAAG
AAAGTCAAGG GTAAAAGCTA CTATTCCACC AAACATGTCG AAGCAGCTAA AGGAGTGCTT
GATAAGGCAG CTCCAAGCTA CTATACTGTT CGGGAGGCTA TGGAAAAGTT TGGTCTTACT
CGTGACCAGC TCTATCAATA TACCAAACGT TATAATGTTC CTAAACTAAA GCAAGGTCGG
AATGTCCTCA TTTCTCAGCA AGAATTGGAT GAAGTCCTCA AACCTCCCAG CATCACTCGA
TAA
|
|---|
| Protein sequence | MTASKIPIKK VCEHCKQEFI ALKTTTKYCS HRCNSRAYKA QKREERVRRT ELSEQEKKVS
DIIDKPYLSI SEAGRLLGIS RHTIYRYIYS GNLKAYNLSS QRSIVKREDI ERMLAERPYE
KRQPRDAIVI TELYTTDEVC DIHNISRSSL FAIAKRENIP RTYNRGKTYW SKRHIDAYFA
KQAPASHIEE WCTAVEIQER FDMTLTAVYN FISDHNIPRK KVKGKSYYST KHVEAAKGVL
DKAAPSYYTV REAMEKFGLT RDQLYQYTKR YNVPKLKQGR NVLISQQELD EVLKPPSITR
|
|---|
| |