Gene PG0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG0874 
Symbol 
ID2552880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand- 
Start bp937000 
End bp938103 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content43% 
IMG OID637149603 
Productmobilizable transposon, int protein 
Protein accessionNP_905122 
Protein GI34540643 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0746163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACATA CTTGTCCCAA AGTAACGCTC CGACAGAGAG CTATCAGAAA CGGGCGTATA 
TCGCTCTATC TCGATTATTA TCCAGCTGTG CGCAATCCCG AAACCATGCA AATGAGCCGT 
CGGGAGTATC TCGGCATCTA TATCTACGCC CATCCTAAGA ATGAGATGGA GCGAGAGTTT 
AACATGGATA TGTTGAACAA GGCGGAAGCT ATTCGATGTA TCCGTGTACA GTCGCTTATC 
AATGAAGAGT TTGGCTTTCT TGATCGAACT AAAATGAAAA CCGACTTCCT TGCATACTTC 
TTGAAAATGT GTCGAAAGAA AGACCAAAAG TGGCGCATCG TCTATCAACA CTTTTACAAC 
TATGTGCAAG GACATTGCAC ATTTGGAGAC ATAACGATAG AGCTATGCCA AGGTTTTCGA 
GAGTACCTTC TCAACGCCAA GCAACTCAAA CGAAAAGGAA AAGTCTCCAC AAACTCTGCA 
TCTGGCTACT ATTCCACTTT TCGGGGGCTA CTGAAGATTG CGTACCGAGA TAAGTGGCTA 
AGGGAGAATA TCAATGACTT TTTAGATAAG ATAGAAGCTA AGGAGGTCAA GAAAGAGTAT 
TTGACACTCG ATGAAGTGAA GATACTTGCT CAGACACCCT GTGAGCATGA TGTTCTGAAA 
AGAGCTTCTC TCTTCTCTTG CCTTACGGGG CTACGCATCA GCGATATTCT CAATCTCCGA 
TGGGAAGATT TCACTCTTGC TCCTGACCAA GGCTATTGCA TCCGCATCAG GACACAGAAG 
ACCTCTACCG AAGCTACTCT CCCAATCAGT TATGAAGCTT ATGAACTATG TGGAGAGCCA 
TCATCGGGTA AAGTCTTCAA AGGCTTGCAG CGCAGTATGA TCAATTATCC TTTGAAAAAA 
TGGATTAAGC AGGCTGGGAT TATGAAGCAT ATCACTTTTC ACTGCTTTCG TCACTCTTAT 
GCCGTGATAC AGATTTCATT AGGTACAGAT ATTTATACGG TATCGAAGAT GCTCACCCAT 
AAGAATGTGT CCACAACCCA AATCTATGCC GACCTTGTAA ACTCGAAAAA GCGTGAAACA 
GCTGAGAAGA TTTCCCTAAA GTAG
 
Protein sequence
MRHTCPKVTL RQRAIRNGRI SLYLDYYPAV RNPETMQMSR REYLGIYIYA HPKNEMEREF 
NMDMLNKAEA IRCIRVQSLI NEEFGFLDRT KMKTDFLAYF LKMCRKKDQK WRIVYQHFYN 
YVQGHCTFGD ITIELCQGFR EYLLNAKQLK RKGKVSTNSA SGYYSTFRGL LKIAYRDKWL 
RENINDFLDK IEAKEVKKEY LTLDEVKILA QTPCEHDVLK RASLFSCLTG LRISDILNLR 
WEDFTLAPDQ GYCIRIRTQK TSTEATLPIS YEAYELCGEP SSGKVFKGLQ RSMINYPLKK 
WIKQAGIMKH ITFHCFRHSY AVIQISLGTD IYTVSKMLTH KNVSTTQIYA DLVNSKKRET 
AEKISLK