Gene PG0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG0861 
Symbol 
ID2552884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp919387 
End bp922869 
Gene Length3483 bp 
Protein Length1160 aa 
Translation table11 
GC content48% 
IMG OID637149591 
ProductSnf2/Rad54 family helicase 
Protein accessionNP_905110 
Protein GI34540631 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0001848 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTATTAC GCAATACCTT AATTGATAAT TCTTCGCCCG AACTTTCTAT GAGTTCCTGT 
CTGAAACAAT GTTTTAGATT GGATTGGGTC AATCGAGTTC GAATAGCCAC GGGATATTGG
GATGTCCCAG GTATGGCACT TGTGATAAAG GAACTATCTG CCTTTCTAGA GAGAGAGGGA
ACTATGTTGC AGATCCTCAT AGGTAAGGAT CCGTATGTAT ACTCCTCTTT ACTCAAAAAT
CCGAAGTATC AAGACGCATC TTTTCCTCAC GATTTTATTC GTACTGATAT ACACAATCTA
GAGCTCCATG AGGAGTATAT GCAAGTCATC AAACTATTGC TCAAGCACTG CGAGTCTAGC
AAAATACAAA TACGTATTTA TCTACGAAAT GCTCAGGGTG AGATTGAGTT CCTACACTCC
AAGTGTTATA TTTGCTCGGG TGTAGACGAC TCTCTAGGGA TTATCGGCAG TTCTAACTTT
ACAAGCCGAG GGTTAATAGG GAATGCGGAG TTGAATTATC TCGAGAGTGA TTCTCGAGTA
GTAACTGCTA AACCTCAAAA GGGATCTGCT GCCAAGGGAC ATAGTCATTG GTTTGATGAA
AAATGGACTA TAGCCGAAGA CTGGAGCCAA GAGTTTCTAG AGCAAGTTAT TAAGACTGCA
CCTATTGCTC AGGAGACCAT GAAATCTGCC AAACAAGAGA TGCAGGAGCA ATCACTATCT
CCATACGAAC TGTATATCAA GTTACTACAG TACAAGTTCA GCTCTCTAGT CGACAAAGAT
CTCAACGAGA TCCTAACGGG TTACCTACCT AGCACTTTCG ATGCCTTCGA GTACCAGCTA
GACGCGGTCA AGCAGTGCTA TAGCATCATG CAGGAACATG GAGGATTTAT GCTCTCGGAT
GTCGTGGGAC TTGGCAAAAC TGTAGTGGGC ACATTACTCG TCAAGCACTT CCTATCTATG
CCCGAAGATG ATGGTCGCAA CAAAAGGGTA CTGATCATCA CTCCTCCTGC AATACTAGAA
ACATGGCGAG AAACCATTGA TCTATTTGAT GTAGACAAAC CAGAGTCCAT AGCTCCCTCG
ATCGACTTCG TTACCATGGG GAGCATAGGC AAGCTCGTAG ATGATATCGA GGACGAAGAC
GAGCTAAATC TAGAGGAGCT AGATAGTGGA GAGTTTATTG AGCCACTACC CTGCGCCAAC
TACGGCCTGA TTCTCATCGA CGAAAGCCAT CGACTCCGCA ACAATCATAC TCAGATGTAT
CAGTCTCTCG ACACCCTCAT TGAGCAGATT GTGCTGCGAG AGGGGGCATA TCCCTATATC
GGATTGCTCT CTGCTACCCC CCAAAACAAT CGCCCAGATG ACCTCAAACA TCAGATATAT
TTATTCCAAC GGAACCATAC GGACTCTACG CTACGCAAGG CCAATGGTGG CAATCTGGAG
AGTTTTTTTG CCGATATAGC TCGTGAATAT CAATCTGTCA TATACTCTCG CTACGACGAA
GGCCCAACGG CAGAGCAAAT ACAGCAGAGT AGGAAACTAC TCAATGACTT GTCTAGTCGC
GTAAGAGACT GCGTCCTACA GGATATACTC GTCAGACGCA CCCGAACCGA CATCCGTAAG
TACTACCCTG AGACCAAACT TACCTTTCCC GAGATTAGTG GCCCTCATAG CTTTGAGTAT
CGTATGAGCA AGAGCCTTGC CAAACTCTTC GCTCGTACGA TGGACTGCAT TGCGCCGAAA
GAGAATTTTC AGTTCGACAG CTCTACCTCT CTATGCTACT ACCGATATCG AGCTATTGAG
TACCTGAGAG ACGAGAGCAC GCGTAAGCTC TACTCGGGGC GCAACATGGA TGCCGAGCGA
TTCTCCCATC AGCTAGCACG CATTATGCAG ATTGGCCTGG TAAAACGCAT CGAGAGTAGC
TTCTCCGCCT TCAAGGTCTC GCTCAAAAAT CTCAAGCGTT ACACCCAAAA TATGGTGGAT
ATGTGGGAGC ACGATACCAT ATTCATCTGC CCACAGATAG ATGTGAATGC AGAGCTCAAT
CCCCGTAAGC ATTGGGATAG TACGAGGAAA TTGTTCTCCT TCGAAGAGTG TGCCGAGGAT
CTACGCAAAA AGATCAACAA GCTCAACTCC TCTGGATCGA ATGAGAAAGG GCGAAATAGA
GAGTATCGAC GTGAGGACTT TGCTCCAGAA TACATTGATC TACTCCGTCA GGATCTAGCC
CTCATCGACC AGCTAGATGA GCAGTGGAGC ATCTACTCCG ACGATCCCAA ACTAGACGAT
TTTAAGCGAC AGCTGCTACC TAGTCTGCTC AGTCTGGAGC GTAATCCAGA GCAGAAACTC
GTTATCTTCA CCGAGGCGAT AGACACTGTG CGAGCCATTG AGCGGGCCAT CGAGAGTGTC
GATGACCGCC TCTCGGTGCT CTCGATCACA GCGAAGAACC GCCGAGAGCG CGAGGAAGAT
ATCCGAGCAA ATTTCGATGC CAACTACAAA GGGGAGCAGC GAGATGACTA CCAGATCATC
ATCACGACAG AAGTGCTTGC GGAGGGTATC AACCTACACC GTGCCAACAG CATACTCAAC
TACGATACTC CATGGAATGC TACGCGCCTG ATGCAACGCA TCGGGCGAGT CAACCGCATC
GGCTCCCAAG CTCCCTGCGT CTATGTCTAT AACTTCATGC CGAGTGCAGA GGGAGATGCC
GAGATCAATC TCGTCAAGAA AGCATATACC AAGCTACAGT CTTTCCACAC ACTTTTCGGT
GAGGATAGTC AAATCTTCAG TGAAGAAGAA GAGGTTGTAC ACCACGAGCT GAAAACCCAG
ATCGAGGGCG CGGAGTCTGC CCTAGAGCAA TACCTCTACG AGCTCAAAAC CTACAAGGCG
CAGCATCCAG AACGATACGA CTATATCGCT CGGCAGAGCG AAGGGCTAGA GTTGGCTGTA
TCTGAGACAG AGGGGCAAGC TCTCTTCGTC GTCCGCAGCC CCAAGTGCCC TGCGATGTTC
GTTCGCTATG ATGCCCTAGA GGATAAGTGC TCTATGCTCT CTGCCCCACA GATGTACGAG
GCTTTCCGCT CTGCTACGTT TGGAGCTCAA GCCTCCTTCG CCTTGCCCAA GGATTGGCAA
GCACGGCGAG ATGCAGCGGT ACTCGCCGTC AACCAAGCTC TGGTCAAGCG TAATCTAAAT
ATGAAGAGAT CGGCTCGAGC TACTGAGGCT AAGGCAATCA TCGACCAAAT GAAAGAGATG
CCGATGGAGG CACACTCACG TAAGCTACTG GCTTCCGCTC GCAAACTAGT GGATAAGGGA
AATCCAGATA TTATTAAGCG CATAATCGGC ATCGGCCACC TCCTCAAAGA GCGAGAGGGG
TCTTTACTGC CTATTACACA GGATGAGATC GATACGATTA TTCACAAAGA AATAGAGATA
TTGGTCTCTG GCATCGCCAA GAAGTTTGGC CAAGCCGAGG TGTTTATTGG TTTATCACTA
TAA
 
Protein sequence
MLLRNTLIDN SSPELSMSSC LKQCFRLDWV NRVRIATGYW DVPGMALVIK ELSAFLEREG 
TMLQILIGKD PYVYSSLLKN PKYQDASFPH DFIRTDIHNL ELHEEYMQVI KLLLKHCESS
KIQIRIYLRN AQGEIEFLHS KCYICSGVDD SLGIIGSSNF TSRGLIGNAE LNYLESDSRV
VTAKPQKGSA AKGHSHWFDE KWTIAEDWSQ EFLEQVIKTA PIAQETMKSA KQEMQEQSLS
PYELYIKLLQ YKFSSLVDKD LNEILTGYLP STFDAFEYQL DAVKQCYSIM QEHGGFMLSD
VVGLGKTVVG TLLVKHFLSM PEDDGRNKRV LIITPPAILE TWRETIDLFD VDKPESIAPS
IDFVTMGSIG KLVDDIEDED ELNLEELDSG EFIEPLPCAN YGLILIDESH RLRNNHTQMY
QSLDTLIEQI VLREGAYPYI GLLSATPQNN RPDDLKHQIY LFQRNHTDST LRKANGGNLE
SFFADIAREY QSVIYSRYDE GPTAEQIQQS RKLLNDLSSR VRDCVLQDIL VRRTRTDIRK
YYPETKLTFP EISGPHSFEY RMSKSLAKLF ARTMDCIAPK ENFQFDSSTS LCYYRYRAIE
YLRDESTRKL YSGRNMDAER FSHQLARIMQ IGLVKRIESS FSAFKVSLKN LKRYTQNMVD
MWEHDTIFIC PQIDVNAELN PRKHWDSTRK LFSFEECAED LRKKINKLNS SGSNEKGRNR
EYRREDFAPE YIDLLRQDLA LIDQLDEQWS IYSDDPKLDD FKRQLLPSLL SLERNPEQKL
VIFTEAIDTV RAIERAIESV DDRLSVLSIT AKNRREREED IRANFDANYK GEQRDDYQII
ITTEVLAEGI NLHRANSILN YDTPWNATRL MQRIGRVNRI GSQAPCVYVY NFMPSAEGDA
EINLVKKAYT KLQSFHTLFG EDSQIFSEEE EVVHHELKTQ IEGAESALEQ YLYELKTYKA
QHPERYDYIA RQSEGLELAV SETEGQALFV VRSPKCPAMF VRYDALEDKC SMLSAPQMYE
AFRSATFGAQ ASFALPKDWQ ARRDAAVLAV NQALVKRNLN MKRSARATEA KAIIDQMKEM
PMEAHSRKLL ASARKLVDKG NPDIIKRIIG IGHLLKEREG SLLPITQDEI DTIIHKEIEI
LVSGIAKKFG QAEVFIGLSL