Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0861 |
Symbol | |
ID | 2552884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 919387 |
End bp | 922869 |
Gene Length | 3483 bp |
Protein Length | 1160 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637149591 |
Product | Snf2/Rad54 family helicase |
Protein accession | NP_905110 |
Protein GI | 34540631 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0001848 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTATTAC GCAATACCTT AATTGATAAT TCTTCGCCCG AACTTTCTAT GAGTTCCTGT CTGAAACAAT GTTTTAGATT GGATTGGGTC AATCGAGTTC GAATAGCCAC GGGATATTGG GATGTCCCAG GTATGGCACT TGTGATAAAG GAACTATCTG CCTTTCTAGA GAGAGAGGGA ACTATGTTGC AGATCCTCAT AGGTAAGGAT CCGTATGTAT ACTCCTCTTT ACTCAAAAAT CCGAAGTATC AAGACGCATC TTTTCCTCAC GATTTTATTC GTACTGATAT ACACAATCTA GAGCTCCATG AGGAGTATAT GCAAGTCATC AAACTATTGC TCAAGCACTG CGAGTCTAGC AAAATACAAA TACGTATTTA TCTACGAAAT GCTCAGGGTG AGATTGAGTT CCTACACTCC AAGTGTTATA TTTGCTCGGG TGTAGACGAC TCTCTAGGGA TTATCGGCAG TTCTAACTTT ACAAGCCGAG GGTTAATAGG GAATGCGGAG TTGAATTATC TCGAGAGTGA TTCTCGAGTA GTAACTGCTA AACCTCAAAA GGGATCTGCT GCCAAGGGAC ATAGTCATTG GTTTGATGAA AAATGGACTA TAGCCGAAGA CTGGAGCCAA GAGTTTCTAG AGCAAGTTAT TAAGACTGCA CCTATTGCTC AGGAGACCAT GAAATCTGCC AAACAAGAGA TGCAGGAGCA ATCACTATCT CCATACGAAC TGTATATCAA GTTACTACAG TACAAGTTCA GCTCTCTAGT CGACAAAGAT CTCAACGAGA TCCTAACGGG TTACCTACCT AGCACTTTCG ATGCCTTCGA GTACCAGCTA GACGCGGTCA AGCAGTGCTA TAGCATCATG CAGGAACATG GAGGATTTAT GCTCTCGGAT GTCGTGGGAC TTGGCAAAAC TGTAGTGGGC ACATTACTCG TCAAGCACTT CCTATCTATG CCCGAAGATG ATGGTCGCAA CAAAAGGGTA CTGATCATCA CTCCTCCTGC AATACTAGAA ACATGGCGAG AAACCATTGA TCTATTTGAT GTAGACAAAC CAGAGTCCAT AGCTCCCTCG ATCGACTTCG TTACCATGGG GAGCATAGGC AAGCTCGTAG ATGATATCGA GGACGAAGAC GAGCTAAATC TAGAGGAGCT AGATAGTGGA GAGTTTATTG AGCCACTACC CTGCGCCAAC TACGGCCTGA TTCTCATCGA CGAAAGCCAT CGACTCCGCA ACAATCATAC TCAGATGTAT CAGTCTCTCG ACACCCTCAT TGAGCAGATT GTGCTGCGAG AGGGGGCATA TCCCTATATC GGATTGCTCT CTGCTACCCC CCAAAACAAT CGCCCAGATG ACCTCAAACA TCAGATATAT TTATTCCAAC GGAACCATAC GGACTCTACG CTACGCAAGG CCAATGGTGG CAATCTGGAG AGTTTTTTTG CCGATATAGC TCGTGAATAT CAATCTGTCA TATACTCTCG CTACGACGAA GGCCCAACGG CAGAGCAAAT ACAGCAGAGT AGGAAACTAC TCAATGACTT GTCTAGTCGC GTAAGAGACT GCGTCCTACA GGATATACTC GTCAGACGCA CCCGAACCGA CATCCGTAAG TACTACCCTG AGACCAAACT TACCTTTCCC GAGATTAGTG GCCCTCATAG CTTTGAGTAT CGTATGAGCA AGAGCCTTGC CAAACTCTTC GCTCGTACGA TGGACTGCAT TGCGCCGAAA GAGAATTTTC AGTTCGACAG CTCTACCTCT CTATGCTACT ACCGATATCG AGCTATTGAG TACCTGAGAG ACGAGAGCAC GCGTAAGCTC TACTCGGGGC GCAACATGGA TGCCGAGCGA TTCTCCCATC AGCTAGCACG CATTATGCAG ATTGGCCTGG TAAAACGCAT CGAGAGTAGC TTCTCCGCCT TCAAGGTCTC GCTCAAAAAT CTCAAGCGTT ACACCCAAAA TATGGTGGAT ATGTGGGAGC ACGATACCAT ATTCATCTGC CCACAGATAG ATGTGAATGC AGAGCTCAAT CCCCGTAAGC ATTGGGATAG TACGAGGAAA TTGTTCTCCT TCGAAGAGTG TGCCGAGGAT CTACGCAAAA AGATCAACAA GCTCAACTCC TCTGGATCGA ATGAGAAAGG GCGAAATAGA GAGTATCGAC GTGAGGACTT TGCTCCAGAA TACATTGATC TACTCCGTCA GGATCTAGCC CTCATCGACC AGCTAGATGA GCAGTGGAGC ATCTACTCCG ACGATCCCAA ACTAGACGAT TTTAAGCGAC AGCTGCTACC TAGTCTGCTC AGTCTGGAGC GTAATCCAGA GCAGAAACTC GTTATCTTCA CCGAGGCGAT AGACACTGTG CGAGCCATTG AGCGGGCCAT CGAGAGTGTC GATGACCGCC TCTCGGTGCT CTCGATCACA GCGAAGAACC GCCGAGAGCG CGAGGAAGAT ATCCGAGCAA ATTTCGATGC CAACTACAAA GGGGAGCAGC GAGATGACTA CCAGATCATC ATCACGACAG AAGTGCTTGC GGAGGGTATC AACCTACACC GTGCCAACAG CATACTCAAC TACGATACTC CATGGAATGC TACGCGCCTG ATGCAACGCA TCGGGCGAGT CAACCGCATC GGCTCCCAAG CTCCCTGCGT CTATGTCTAT AACTTCATGC CGAGTGCAGA GGGAGATGCC GAGATCAATC TCGTCAAGAA AGCATATACC AAGCTACAGT CTTTCCACAC ACTTTTCGGT GAGGATAGTC AAATCTTCAG TGAAGAAGAA GAGGTTGTAC ACCACGAGCT GAAAACCCAG ATCGAGGGCG CGGAGTCTGC CCTAGAGCAA TACCTCTACG AGCTCAAAAC CTACAAGGCG CAGCATCCAG AACGATACGA CTATATCGCT CGGCAGAGCG AAGGGCTAGA GTTGGCTGTA TCTGAGACAG AGGGGCAAGC TCTCTTCGTC GTCCGCAGCC CCAAGTGCCC TGCGATGTTC GTTCGCTATG ATGCCCTAGA GGATAAGTGC TCTATGCTCT CTGCCCCACA GATGTACGAG GCTTTCCGCT CTGCTACGTT TGGAGCTCAA GCCTCCTTCG CCTTGCCCAA GGATTGGCAA GCACGGCGAG ATGCAGCGGT ACTCGCCGTC AACCAAGCTC TGGTCAAGCG TAATCTAAAT ATGAAGAGAT CGGCTCGAGC TACTGAGGCT AAGGCAATCA TCGACCAAAT GAAAGAGATG CCGATGGAGG CACACTCACG TAAGCTACTG GCTTCCGCTC GCAAACTAGT GGATAAGGGA AATCCAGATA TTATTAAGCG CATAATCGGC ATCGGCCACC TCCTCAAAGA GCGAGAGGGG TCTTTACTGC CTATTACACA GGATGAGATC GATACGATTA TTCACAAAGA AATAGAGATA TTGGTCTCTG GCATCGCCAA GAAGTTTGGC CAAGCCGAGG TGTTTATTGG TTTATCACTA TAA
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Protein sequence | MLLRNTLIDN SSPELSMSSC LKQCFRLDWV NRVRIATGYW DVPGMALVIK ELSAFLEREG TMLQILIGKD PYVYSSLLKN PKYQDASFPH DFIRTDIHNL ELHEEYMQVI KLLLKHCESS KIQIRIYLRN AQGEIEFLHS KCYICSGVDD SLGIIGSSNF TSRGLIGNAE LNYLESDSRV VTAKPQKGSA AKGHSHWFDE KWTIAEDWSQ EFLEQVIKTA PIAQETMKSA KQEMQEQSLS PYELYIKLLQ YKFSSLVDKD LNEILTGYLP STFDAFEYQL DAVKQCYSIM QEHGGFMLSD VVGLGKTVVG TLLVKHFLSM PEDDGRNKRV LIITPPAILE TWRETIDLFD VDKPESIAPS IDFVTMGSIG KLVDDIEDED ELNLEELDSG EFIEPLPCAN YGLILIDESH RLRNNHTQMY QSLDTLIEQI VLREGAYPYI GLLSATPQNN RPDDLKHQIY LFQRNHTDST LRKANGGNLE SFFADIAREY QSVIYSRYDE GPTAEQIQQS RKLLNDLSSR VRDCVLQDIL VRRTRTDIRK YYPETKLTFP EISGPHSFEY RMSKSLAKLF ARTMDCIAPK ENFQFDSSTS LCYYRYRAIE YLRDESTRKL YSGRNMDAER FSHQLARIMQ IGLVKRIESS FSAFKVSLKN LKRYTQNMVD MWEHDTIFIC PQIDVNAELN PRKHWDSTRK LFSFEECAED LRKKINKLNS SGSNEKGRNR EYRREDFAPE YIDLLRQDLA LIDQLDEQWS IYSDDPKLDD FKRQLLPSLL SLERNPEQKL VIFTEAIDTV RAIERAIESV DDRLSVLSIT AKNRREREED IRANFDANYK GEQRDDYQII ITTEVLAEGI NLHRANSILN YDTPWNATRL MQRIGRVNRI GSQAPCVYVY NFMPSAEGDA EINLVKKAYT KLQSFHTLFG EDSQIFSEEE EVVHHELKTQ IEGAESALEQ YLYELKTYKA QHPERYDYIA RQSEGLELAV SETEGQALFV VRSPKCPAMF VRYDALEDKC SMLSAPQMYE AFRSATFGAQ ASFALPKDWQ ARRDAAVLAV NQALVKRNLN MKRSARATEA KAIIDQMKEM PMEAHSRKLL ASARKLVDKG NPDIIKRIIG IGHLLKEREG SLLPITQDEI DTIIHKEIEI LVSGIAKKFG QAEVFIGLSL
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