| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0842 |
|---|
| Symbol | |
|---|
| ID | 2552860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 903900 |
|---|
| End bp | 904964 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637149574 |
|---|
| Product | mobilizable transposon protein |
|---|
| Protein accession | NP_905094 |
|---|
| Protein GI | 34540615 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00616045 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACC CCAATGCACC CTTTCAGCCA CCGATGGACA TTGATGCTGT GTGGCAACAT
TCGCTCATCC GTGTGACGGA TGCCTTTGCT CTTCCACCCA TCGTCTTGCG TGTGGATGAC
GCTATCATCG GCACGTTGGG CAACTTCAGT GTGTCCACGG GCAAGGCGAA AGCTAAGAAA
ACGTTCAACG TCTGCGCCTT GGTAGCAGCA GCCCTTGTCA ATGGGCAAGT GCTGGAATAT
CAAGCGAGCT TCCCCGAGAG CAAGCGCAAC ATTCTCTACT TCGATACAGA GCAAAGTCCT
TATCATTGTC AGCTTGTTCT GCAACGCATT CTGGCTTTAG CCGAACTCCC CCTAGACCAA
CAACCCGAAC ATTTGCTGTT TAGCCATTTG CGCTCAATAG CTAGTCCCGA AGAGCGTAGA
GCCATCATCC GCTATGCCAT TTACCACACA CCCAATGTTG GGCTAGTCGT CATCGATGGC
ATTCGCGACT TGATGCACGA CATCAACAAC TCTGCCGAAG CGACCAATCT TATGGGCGAC
CTGATGCAAT GGACTGGAGA GAGGAACATC CACATTCAAA CCGTTCTGCA TCTCAACAAA
GGAGATGACA ATGCTCGTGG ACACATAGGC ACAGAACTGA ACAACAAAAC GGAAAGTGTC
TTGCTCATCA CCAAGGACAA CAGTGATGCT GACAGGAGCG TTGTCTCAGC GTCCATCATT
CGCTCTAAGC CTTTCCCTCC CTTTGCGTTT AGGCTCACCG AAGTAGACAA CATCTGCCTA
CGCGAGTTAG ACACAGACTT CACGGCCAAA GACGCACAGC CTTTCTCCTA CCAAGAACTA
AGTGGTGAGG AGCATCGCAC AGCCTTGCGA GAAGCCTTTG GCCAGGCTTG TGAGTTGGGC
TATGGCGACC TATTGAAGCG ACTCAGCTCA TCATACTTAG GTGTCAGTGG TCGACCTTAT
GGACAGACGA AGCTCAAAGA ATTGCTCCGC TTTCTCGTGA ACAAACGTAT GCTCGTCAAG
GCTAGCAGAG GACGCTATCA GTTCAACCCA GACTTCCATT ACTGA
|
|---|
| Protein sequence | MNHPNAPFQP PMDIDAVWQH SLIRVTDAFA LPPIVLRVDD AIIGTLGNFS VSTGKAKAKK
TFNVCALVAA ALVNGQVLEY QASFPESKRN ILYFDTEQSP YHCQLVLQRI LALAELPLDQ
QPEHLLFSHL RSIASPEERR AIIRYAIYHT PNVGLVVIDG IRDLMHDINN SAEATNLMGD
LMQWTGERNI HIQTVLHLNK GDDNARGHIG TELNNKTESV LLITKDNSDA DRSVVSASII
RSKPFPPFAF RLTEVDNICL RELDTDFTAK DAQPFSYQEL SGEEHRTALR EAFGQACELG
YGDLLKRLSS SYLGVSGRPY GQTKLKELLR FLVNKRMLVK ASRGRYQFNP DFHY
|
|---|
| |