Gene PG0827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG0827 
Symbol 
ID2552839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp884306 
End bp885664 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content43% 
IMG OID637149563 
ProductMATE efflux family protein 
Protein accessionNP_905083 
Protein GI34540604 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID[TIGR00797] putative efflux protein, MATE family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAACG CTGTGAATAT TTTGCAAGAA GGAAGTATGA TGAAATCCCT GACAAAGTTG 
GGGATACCTA TTGTCATCGC AATGCTGATT ATGGCAATAT ACAATGTGGT AGATACTTTC
TGGGTTGCAC GTTTGGGAAC TCTTCCTGTC GCTGCCGTAT CAGTTGTTTT CCCTTTATCG
TTGGTGTTTC TTGGGATAGG GCTGATGTTT GGTGTTGGGG GCGGAGTGTA TATATCTCGC
TTATTGGGTG CGAAGCAAAT TGTCAAGGCT GGTCAGGTAG CTTCCGTCTC AGTGATCACC
TCTGTGATTT TAGCTGCTCT CATTGCCCTT GTATGCAATG CGTTTCTACC AGAAATTCTG
CTTTTCATGG GGGCAAACGA GGAGATGATG AGCTTAGCGG AAGCATATGG CAGACTGTTC
ATCGTTAGTT GTGTCATAGG AACGTTGAAT GTGTCGATGT CCAATATTAT AGTTTCTCAG
GGGGCTTCAA AAACGTCTGC ATCGGCAATG ATAATAGGTT CTGTTATAAA TGTCGCATTG
GATCCTCTAT TTATCTATGC TTTCGGCTGG GGTGTGAAAG GTGCTGCGTG GGCAACCATT
CTTTCAAGAA TCATTACAAC AATCATTTAC ACCTGCTTCT TTATGAAAGC AGAGGTGAAA
GTTTCGTTTG CCTTGTTCGT CCCAACGATA AGAATGTACT TGGACATCAT AAAGATAGGT
ATTTCAATGC TCTGTTTGCA ACTCCTCCAA ACACTTTCGA TTAGTTTATT GCAGAGAGCT
GCCGTAAAAT ATGGGGCAGA GGCTGTAGCA GCAGTAGGCA TCGTTCTGAA AATTGTAACA
TTGGGAACGA ACGTGGTTTT CGGATTTGTC AAGGGACTCC AACCGATGGC TGGCTATAAC
TACGGGGCAG AAAATTTCCA AAGGTTAAAA GAGGCAGTAC GTTGTTCCTT GATACTGACA
ACCTCATTTT GTGTACTTTG GAGCACTTTC ATACTCGTTT TTGCTTCTCC TGTTATCAGT
TGTTTCGGCA AAGACGAAAC AATGCAAGAA ATTGCACGAA TTGCCCTTAG AGCCAATACG
CTAATGTTTT TCACTTTCGG CTTCCAGTTT GTGTATTCCA CACTATATAT GGCAATCGGA
AGAGCAAGAC AGAGCCTTTT GCTCAATATT GGACGACAGG GACTCTTCTT TATTCCTGTA
ATATTGCTGC TCCCATCATA TTGGGGATTG AACGGAGTGC TTTATGCACA ACCGGTAGCC
GACGTCTTTG CAACTTTGAT GACACTGTTC TTTGCCATTC AAATTCATAG GGAAATTCGT
CATAAATCAC ATCTCACAAC AGAGAATCTA CAATGTTGA
 
Protein sequence
MINAVNILQE GSMMKSLTKL GIPIVIAMLI MAIYNVVDTF WVARLGTLPV AAVSVVFPLS 
LVFLGIGLMF GVGGGVYISR LLGAKQIVKA GQVASVSVIT SVILAALIAL VCNAFLPEIL
LFMGANEEMM SLAEAYGRLF IVSCVIGTLN VSMSNIIVSQ GASKTSASAM IIGSVINVAL
DPLFIYAFGW GVKGAAWATI LSRIITTIIY TCFFMKAEVK VSFALFVPTI RMYLDIIKIG
ISMLCLQLLQ TLSISLLQRA AVKYGAEAVA AVGIVLKIVT LGTNVVFGFV KGLQPMAGYN
YGAENFQRLK EAVRCSLILT TSFCVLWSTF ILVFASPVIS CFGKDETMQE IARIALRANT
LMFFTFGFQF VYSTLYMAIG RARQSLLLNI GRQGLFFIPV ILLLPSYWGL NGVLYAQPVA
DVFATLMTLF FAIQIHREIR HKSHLTTENL QC