Gene PG0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG0807 
Symbol 
ID2552817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand- 
Start bp863720 
End bp864814 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content48% 
IMG OID637149548 
ProductNusB family protein 
Protein accessionNP_905068 
Protein GI34540589 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCTGA TTACCTTTGC CGGACATTAC TTTTCAAGGA TTATAATAAT GATCAATCGA 
GCACTTGTCC GATCCCGAGT TTTGCAACAA GCATATGTGT ATTACCATCG AGATGATGCT 
GATATACAAT CTGCCGAAAA AGAGTTGCTC AACAGTCTGG AGCAGACATA CGACCTATAC 
CTATATTATC TCCTCTTGGT TCCGGAGCTG ACAAGACTGC ATGCGGAAGC CCTCGAAGCC 
AACAAGAACA AGCACTTAGC GACCGAAAAG GACAAAAACC CCAATCTGCG TATGGTACGC 
AACCGGCTTG CCGAAAAGAT CGAGAGCTGC AGGCCTTTGT GGGTAAGAGC CGAACAGAAT 
GCTCTGAATT GGCGTTCCGA AGAAGCTTTT CTGCGACGCC TGCTGAAAAA GATCCATTTG 
TCCGAGACTT TCACCCGTTA TATGAGATCC GATGCCACCG ATGACTTCGA AGCCGACCGC 
TTGTTCTGGA ACGAACTGAT GCGCGACATC ATCCTCCCCG ATGAAGAACT GGCAGAAGTG 
ATGGAAGAGC AAAGTATCTT CTGGGACAAT CAAATACAAC TCATCGAGAA AATCGAGACA 
GAAGAAGCTC CCGACATAGA GGAGGTGGAA CAGTCGGTAC GACAAGCAGT TGCCGATGGC 
AACTACCAAA CGATCCGACA GGAAAATGCA CCTATCGAAA TCGTGAAGGA GTTCGTCCTC 
AAGACAATCC GACGGATCGA GCAAGACACC GATCCATCGG CTATCCTGCT TCCTGCATAC 
AAGGAGAAAG ACGATGCCGT ATTCGGCACC ACCCTACTGC GCAATGCCAT CATCAACGGA 
CAGGAATATC GCCATATCAT CCGTGAAAAT CTGATCAACT GGGAAGTGGA TCGCATAGCG 
GACATGGATA TGCTGATCAT GCAACTGGCT ATCGCCGAGC TGCTCCACTT CCCGAATATT 
CCGGTCTTGG TAACGATCAA TGAATACATC GACCTCTCCA AGCTGTTCAG TACACCCAAG 
AGCGGAACGT TCGTAAACGG GTTGCTGGAT GCTGTGGTCA AAAGTCTCAG AGAGAAAGGC 
AAACTACTCA AATAA
 
Protein sequence
MRLITFAGHY FSRIIIMINR ALVRSRVLQQ AYVYYHRDDA DIQSAEKELL NSLEQTYDLY 
LYYLLLVPEL TRLHAEALEA NKNKHLATEK DKNPNLRMVR NRLAEKIESC RPLWVRAEQN 
ALNWRSEEAF LRRLLKKIHL SETFTRYMRS DATDDFEADR LFWNELMRDI ILPDEELAEV 
MEEQSIFWDN QIQLIEKIET EEAPDIEEVE QSVRQAVADG NYQTIRQENA PIEIVKEFVL 
KTIRRIEQDT DPSAILLPAY KEKDDAVFGT TLLRNAIING QEYRHIIREN LINWEVDRIA 
DMDMLIMQLA IAELLHFPNI PVLVTINEYI DLSKLFSTPK SGTFVNGLLD AVVKSLREKG 
KLLK