| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0766 |
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| Symbol | pnpA |
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| ID | 2552025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 816264 |
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| End bp | 818495 |
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| Gene Length | 2232 bp |
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| Protein Length | 743 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637149505 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | NP_905028 |
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| Protein GI | 34540549 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.365254 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAACG TTGTAAGTAA GACTATCGAT CTGGGAGATG GTCGTTCCAT CAAGATCGAA
ACCGGTAAAT TGGCCAAGCA GGCCGATGGC GCCGTGACAG TCACCATGGG CAATACGGTA
TTGCTCGCTA CAGTTTGTGC AGCCAAAGAC GCTAACCCCG GCTGCGACTT CATGCCTCTT
CAGGTGGAAT ACAAAGAGAA ATACTCCGCC ATCGGACGCT TCCCCGGAGG ATTCACTCGC
CGCGAAGGCA AAGCTTCGGA TTACGAGATC CTGACCTGCC GCCTTGTGGA TCGTGCCCTT
CGTCCGCTAT TCCCGGACAA TTATCATGCA GAGGTATTCG TCAATGTGAT CCTCTTTTCA
GCCGATGGCG AGGATATGCC CGACGCCTTG GCCGGTCTGG CTGCTTCGGC GGCTCTTGCC
GTTTCCGATA TACCGTTCAA CGGCCCTATC AGCGAAGTGC GCGTAGCACG TGTGGACGGC
CGCTATATCG TCAATCCTAC TTTCGAGCAG CTCGAACGCG CAGACATCGA CTTGATGGTC
GGAGCCACAA TGGACAACAT CATGATGGTC GAAGGTGAAA TGGACGAGGT ACAGGAATCC
GAAATGCTCG AAGGCATACG CGTGGCACAC GAAGCCATCA AGGTACAGTG CAAGGCGCAG
CTCGAACTAT CCGAAGCTGT AGGAAAACTT CAAAAGCGTG AATACAGCCA TGAAGTAAAC
GATGAAGACC TGCGCAAGAA AGTGCACGAC GAATGCTATG CTCGTGCCTA TGAGGTGGCT
ACCAGCGGAA CCGGCAAACA CGAGCGCGGC GAAGCTTTTG AAAAGATCGT GGAAGAGTTC
AAAGCTCAAT ATACGGAAGA AGAACTTGCC GAGAAGGCCG AAATGATAGC TCGCTACTAC
CACGATGTGG AAAAAGAAGC GATGCGTCGT GCCATCCTCG ACGAAGGCAA ACGCCTCGAT
GGGCGTAAGA CCACGGAGAT CCGTCCGATA TGGATCGAGA CCGACTGCCT ACCCGGCCCG
CATGGCTCAG CTATATTCAC TCGTGGTGAG ACGCAGTCGC TTACGACCGT TACGCTTGGT
ACGAAGAGCG ACGAAAAGCT CGTGGACGAT GTACTCAATT ATACGAAAGA GCGATTCCTG
CTGCACTACA ACTTCCCTCC TTTCTCTACA GGTGAAGCCC GTCCCCAACG CGGTGTAGGC
CGCCGCGAGA TCGGTCATGG CAATTTGGCG CATCGCGCCC TCAAGCGTAT GATACCGACG
GACTACCCCT ATGTGGTACG TGTAATCAGC GACATTCTGG AGTCCAATGG CTCGTCCTCG
ATGGCCACTG TCTGCGCCGG TACTTTGGCT CTGCGCGATG CCGGTGTACA GATTCGCAAG
CCCGTATCCG GCATTGCTAT GGGCTTGATC TCAGAGAATC AGGGCAAGAA CTACGCCATC
CTCTCCGATA TTCTCGGTGA CGAAGACCAT CTCGGCGATA TGGACTTCAA GGTAACGGGT
ACGAAGGACG GTATTACAGC CACGCAGATG GACATCAAGG TGGATGGTCT CAGCTATGAG
ATTTTGGAGA ATGCTCTGGA GCAAGCCAAG CAAGGACGCC TACACATCCT CGGCAAGATC
ATGGAAGCTC AGCCCGAGAC AAGAGATGAC CTCAAGCCTC ATGCACCGCG TATCGAGAAG
ATGCATATCG GCAAGGAGTT TATCGGAGCA GTCATAGGCC CGGGCGGAAA GATCATCCAA
GGCATACAGG AGAAGAGTGG TGCCACAGTG AACATCGAAG AGGTAGATGG CATGGGTGTC
ATCGAGATCA GTGGTACGAA CAAACCCTGC ATCGATGCTG CAATCGGCAT GATCAAGGGC
ATCGTGGCTA TGCCGGAAGT CGGAGAAACC TATCCGGGCA AGATCACAAG TGTGATGCCA
TACGGCTGCT TCGTCGAATT CCTCCCCGGC AAGGAAGGAC TTCTGCATAT CTCGGAAGTG
GATTGGAAAC GATTCGAGAC CATCGAGGAC ACCAACCTGA AAGAAGGCGA ATCCATCAAC
GTTAAGCTGC TCGATATAGA TCCGAAGACC GGCAAGTTCA AACTCAGCCG CAAGGTGCTA
CTGGAAAAAC CGGAAGGCTA CGTGGAGCCT CAGCCGAGAG AGCGGCGTGA GCGGCGTGAA
GGAGGACGCG AAGGAGGTCG TAACTTCGAA CGTCGTGGTG GTGATCGTGA CCACCGCGAG
CCTCGTGGCT AA
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| Protein sequence | MLNVVSKTID LGDGRSIKIE TGKLAKQADG AVTVTMGNTV LLATVCAAKD ANPGCDFMPL
QVEYKEKYSA IGRFPGGFTR REGKASDYEI LTCRLVDRAL RPLFPDNYHA EVFVNVILFS
ADGEDMPDAL AGLAASAALA VSDIPFNGPI SEVRVARVDG RYIVNPTFEQ LERADIDLMV
GATMDNIMMV EGEMDEVQES EMLEGIRVAH EAIKVQCKAQ LELSEAVGKL QKREYSHEVN
DEDLRKKVHD ECYARAYEVA TSGTGKHERG EAFEKIVEEF KAQYTEEELA EKAEMIARYY
HDVEKEAMRR AILDEGKRLD GRKTTEIRPI WIETDCLPGP HGSAIFTRGE TQSLTTVTLG
TKSDEKLVDD VLNYTKERFL LHYNFPPFST GEARPQRGVG RREIGHGNLA HRALKRMIPT
DYPYVVRVIS DILESNGSSS MATVCAGTLA LRDAGVQIRK PVSGIAMGLI SENQGKNYAI
LSDILGDEDH LGDMDFKVTG TKDGITATQM DIKVDGLSYE ILENALEQAK QGRLHILGKI
MEAQPETRDD LKPHAPRIEK MHIGKEFIGA VIGPGGKIIQ GIQEKSGATV NIEEVDGMGV
IEISGTNKPC IDAAIGMIKG IVAMPEVGET YPGKITSVMP YGCFVEFLPG KEGLLHISEV
DWKRFETIED TNLKEGESIN VKLLDIDPKT GKFKLSRKVL LEKPEGYVEP QPRERRERRE
GGREGGRNFE RRGGDRDHRE PRG
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