| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0646 |
|---|
| Symbol | |
|---|
| ID | 2552539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 698160 |
|---|
| End bp | 699161 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637149401 |
|---|
| Product | iron compound ABC transporter, ATP-binding protein |
|---|
| Protein accession | NP_904926 |
|---|
| Protein GI | 34540447 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.473104 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCATA CCGACAATGT GACCCTGACG GGACTATCTA CCGGATACCG AAGCAAGAAA
ACGGAGCGCA TCGTATCGAA GCTAATCGAC CTTTCCATGC TTAATGGCGA ACTGGTAATG
CTGATGGGTC CGAACGGCTG CGGCAAATCC ACGCTCATGC ACACCATCGC AGGATTACTG
CCACCTATTT CGGGGAATAT CACCATCGCA GGACGCGACA CACACGGTCT CCGCATGAGA
GAGAAAGCCA AGATGCTCAG TCTGGTACTG ACCGACAAAA TAGCAGCGAC GAATCTGACT
GTTCGGGATA TTGTCGTCAT CGGACGCTAT CCCTACGTCA ATTATCGGGG TAGCCTGACC
GCAAAGGACA AGGAGATTGT GAATGAATCG CTCATAGCAT GCCGACTGAT GGGATTCGAA
TCGCGCCAAT ACGGGGAATT AAGCGATGGA GAAAAACAGC GTGTAATGAT AGCCCGCGCT
TTAGCCCAAC AGACTCCCGT GATGCTTCTT GACGAACCTA CGGCACACCT CGACCTGCCA
AGCCGTCTGG AGGTGATCAT CATGCTGCGC GAATTGGCAC GCAAAACGAA CAAGAGTATC
CTCGTTTCTA CCCACGAAAT GGATCTGGCC CTGCAATGGG CGGACACGGT ATGGCTGATG
AACAGCCAAG GGGAGATTTG TCGTGGGGCA CCGGAGGATT TGGTACTGAA CCACTGTTTT
GAAAAAGTAT TCGGCAACGA AACTCTTTCC TTCAATATAG ACAGCGGAGC CTTCTCCGTC
AAACATAAAA CGGCTACACC TGTTTCTGTA GAAGGACAGG GTGCTGCCTA CAAATGGACA
CTGAGTGCTT TGCACCGGAA TGGCTATGTG GAATCTGCAG ATGCCTCCGA CCGCAAAATC
ACCGTGGGAG AGGGCTGCTG GATTCTGCAG GAGGGCGATT CCTCGAAAAG CTTCGACTCC
ATCGGCTCCT TGCTACAAAC GCTGCACGCT CACCACGAAT GA
|
|---|
| Protein sequence | MIHTDNVTLT GLSTGYRSKK TERIVSKLID LSMLNGELVM LMGPNGCGKS TLMHTIAGLL
PPISGNITIA GRDTHGLRMR EKAKMLSLVL TDKIAATNLT VRDIVVIGRY PYVNYRGSLT
AKDKEIVNES LIACRLMGFE SRQYGELSDG EKQRVMIARA LAQQTPVMLL DEPTAHLDLP
SRLEVIIMLR ELARKTNKSI LVSTHEMDLA LQWADTVWLM NSQGEICRGA PEDLVLNHCF
EKVFGNETLS FNIDSGAFSV KHKTATPVSV EGQGAAYKWT LSALHRNGYV ESADASDRKI
TVGEGCWILQ EGDSSKSFDS IGSLLQTLHA HHE
|
|---|
| |