| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0623 |
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| Symbol | tpiA |
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| ID | 2552517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 677401 |
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| End bp | 678156 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637149383 |
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| Product | triosephosphate isomerase |
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| Protein accession | NP_904908 |
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| Protein GI | 34540429 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.524933 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAAAAA ACATCGTAGC AGGCAACTGG AAAATGAACA AAACCCTCCA AGAGGGGCTT
GCATTGGCAA AGGAGTTGGA CGCAGCTTTG AAAGGGCGTA CGATCAACTG TGACGTGATT
ATCGGAACCC CATTCATCCA TTTGGCAAGT ATTGCGGCAG CCATCGATAC CACACGTATC
GGAGTTGCAG CTGAAAACTG TGCCGATAAG GAGTCGGGTG CATATACCGG AGAGGTCTCT
GCTGCTATGG TAGCCAGTAC CGGTGCTCGG TATGTGATTA TAGGACATAG CGAACGCCGT
GCTTACTATC ATGAAACATC CCCAATCCTG ATGGAGAAGG TGAAGTTGGC TTTGTCCAAT
GGCTTGACCC CCATTTTCTG TGTTGGCGAA GTCTTGGAAG AGCGCGAAGC AGGCAAGCAC
TTCGAGGTAG TCGCTCGTCA GGTGGAAGAA GCCCTGTTTA CTTTGGATCA GACCGACTTT
GCCAAATTGA TCCTTGCTTA CGAGCCTGTG TGGGCCATCG GTACGGGTAA GACGGCTACG
GCAGACCAAG CTCAAGAGAT GCATGCACAT ATTCGTAAGA GTATAGCCGC TAAATATGGA
AAAGAGGTTG CGAACGGTTG TTCCATTCTC TATGGAGGCA GTTGCAATGC AGCCAATGCC
AAAGAACTCT TTAGCCGTGC GGATGTAGAT GGTGGGCTTA TCGGAGGGGC TTCTCTCTCG
GTAGACAAAT TCTTGCCTAT CATCGAAGCA TTCTGA
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| Protein sequence | MRKNIVAGNW KMNKTLQEGL ALAKELDAAL KGRTINCDVI IGTPFIHLAS IAAAIDTTRI
GVAAENCADK ESGAYTGEVS AAMVASTGAR YVIIGHSERR AYYHETSPIL MEKVKLALSN
GLTPIFCVGE VLEEREAGKH FEVVARQVEE ALFTLDQTDF AKLILAYEPV WAIGTGKTAT
ADQAQEMHAH IRKSIAAKYG KEVANGCSIL YGGSCNAANA KELFSRADVD GGLIGGASLS
VDKFLPIIEA F
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