Gene PG0615 details

Gene Information

• Locus tag: PG0615
• Symbol: typA
• ID: 2552506
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 667173
• End bp: 668972
• Gene Length: 1800 bp
• Protein Length: 599 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637149375
• Product: GTP-binding protein TypA
• Protein accession: NP_904900
• Protein GI: 34540421
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.546843
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAGGACA TCAGGAACAT TGCCATCATT GCCCACGTAG ACCACGGTAA AACCACGCTC 
GTGGACAAGA TGCTCTTAGC CGGCAAGCTT TTCAGGGATG ACAAGGCTGC CGAAGTGGAT 
ACTTTCCTCG ATAGCAACGA CTTGGAACGC GAACGCGGTA TCACCATTCT TTCCAAAAAC 
GTCAGTATTC GCTATAAGGG TTGTAAAATC AATATCATCG ATACCCCGGG ACACGCCGAC 
TTCGGCGGTG AAGTGGAGCG CGTGCTCAAT ATGGCCGATG GATGCCTCCT GCTGGTGGAT 
GCCTTCGAGG GGCCGATGCC GCAGACTCGG TTTGTGCTGC AAAAAGCCAT CGAGATGGGA 
CTCAAACCCA TCGTCGTCAT CAACAAAGTA GACAAACTCA ACTGCCGTCC GAGCGAAGTG 
CAGGATATGG TGTTCGACCT CATGTACAGC CTCGATGCTT CGGAGGATCA GCTCGATTTC 
CCCACCATAT ACGGCTCGGC CAAGCAGGGT TGGATGAGTA CCGACTACAA ACATCCCACA 
CAGGACATTG CTCCGCTACT CGATGCCATC ATCCGACACA TCCCCGCTCC CGAACAGCCG 
GAGGGTGCCA CGCAGATGCT CATTACATCG CTTGACTATA CTTCCTATGT GGGGCGTATT 
GCCGTCGGGC GAGTACATCG CGGCACACTC CGCGAAGGGC AGGATATTAT GCTCTGCAAG 
CGTGATGGTA CGATGCAGAA GCAGCGAATC AAGGAGCTGA ATACCTTCGA AGGCTTGGGA 
CGAGCCAAAG CCGACCATGT GGATGCAGGA GATATATGCG CTATCATCGG TTTGGAAAGT 
TTCGAAATCG GAGAGACCAT TGCCGATGCC AATGCTCCCG AAGCTCTTCA GGCTATTGCG 
ATCGATGAGC CGACGATGAG TATGCTCTTT ACCATCAACA ACTCGCCGTT CTACGGCAAG 
GAGGGTAAGT ATGTCACCAG CCGGCATATT CACGACCGTC TGATGCGAGA ACTGGACAAG 
AATCTGGCTC TTCGTGTGGA GACCACCGAT AACGCCGACA GCTGGCTCGT ATTCGGGCGT 
GGCGTACTGC ATCTTTCCGT TCTTATCGAG ACCATGCGCC GCGAGGGGTA CGAACTTCAA 
GTGGGGCAGC CCCAAGTGAT CATCAAAGAG ATAGACGGCG AGCGGTGCGA ACCGATAGAG 
CTTCTTTCGA TCAATCTGCC GGAAGAGTCC TCCAGTCGTA TCATAGACAT AGTGACCCGT 
CGCAAGGGAG AGATGGTGAT GATGGAAAAC AAGAACGACC GGGTGTTTAT GGAGTTCCAT 
ATCCCTTCAC GAGGGATCAT CGGACTCAAC AATGCCGTAC TGACAGCATC GGCAGGAGAG 
GCCGTAATCG CGCACCGCTT CTTGGAATTC CAACCGTGGA AAGGGGAGAT AGAGCGGCGC 
AGCAACGGGT CGATCATTGC GCTCGAAAGC GGAACGGCCT ATGCCTATGC CCTGAATAAT 
CTCCAAAGCC GTGGACGCTT CTTCATCTCT CCGCAGGAGG AGGTCTATGC CGGTCAGGTC 
GTAGGCGAGC ACACGAAGGA GGGCGATCTC TGCGTCAACG TCTGCAAGAG CAAAAAGCTT 
ACCAATATGC GTGCTTCCGG TAGCGATGAT AAGGTGTCAC TGGCTCCACC GGTGGTATTC 
AGCCTCGAAG ATGCTTTGGA GTATATCAAG TATGACGAGT ATGTGGAGGT GACGCCGAAA 
AGCATGCGCA TGCGTAAAAT TATCCTCGAC GAGACAGAAC GTAAACGACA AGGACGATAA 

 

Protein sequence

MQDIRNIAII AHVDHGKTTL VDKMLLAGKL FRDDKAAEVD TFLDSNDLER ERGITILSKN 
VSIRYKGCKI NIIDTPGHAD FGGEVERVLN MADGCLLLVD AFEGPMPQTR FVLQKAIEMG 
LKPIVVINKV DKLNCRPSEV QDMVFDLMYS LDASEDQLDF PTIYGSAKQG WMSTDYKHPT 
QDIAPLLDAI IRHIPAPEQP EGATQMLITS LDYTSYVGRI AVGRVHRGTL REGQDIMLCK 
RDGTMQKQRI KELNTFEGLG RAKADHVDAG DICAIIGLES FEIGETIADA NAPEALQAIA 
IDEPTMSMLF TINNSPFYGK EGKYVTSRHI HDRLMRELDK NLALRVETTD NADSWLVFGR 
GVLHLSVLIE TMRREGYELQ VGQPQVIIKE IDGERCEPIE LLSINLPEES SSRIIDIVTR 
RKGEMVMMEN KNDRVFMEFH IPSRGIIGLN NAVLTASAGE AVIAHRFLEF QPWKGEIERR 
SNGSIIALES GTAYAYALNN LQSRGRFFIS PQEEVYAGQV VGEHTKEGDL CVNVCKSKKL 
TNMRASGSDD KVSLAPPVVF SLEDALEYIK YDEYVEVTPK SMRMRKIILD ETERKRQGR