| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0578 |
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| Symbol | murD |
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| ID | 2552460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | + |
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| Start bp | 634620 |
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| End bp | 635972 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637149341 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | NP_904866 |
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| Protein GI | 34540387 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACCGAT TGAAATATGA TATAGTTGTT CTCGGAGCAG GAGAAAGCGG AGTAGGAGCA
GCTCTTTTGG CTCAAGCCAA AGGTCTGCAT GTATTTGTAT CCGACTACGG AAAGATAGCC
CCGAAATACA AGGAAGAACT TAACCGATAT GCCATACCGT ACGAAGAAGG TAGGCACACA
GAGGCGATAA TCCTCGAAGC AAAAGAAATT ATCAAAAGCC CGGGTATTCC CGACACTGCT
CCTATTATTC GACAGGCTGT TGCCAAAGAG ATAGGTATCG TTTCGGAAAT AGAGTTCGCC
GGACGTTACA CCGATGCATT TATGGTGTGC ATCACGGGTA GTAATGGCAA GACAACAACA
ACCATGTGGT TGTATCACAC GCTCTGTAAG GCCGGTTTGG ATGTAGGTTT GGCAGGCAAT
GTCGGTTTTA GTCTGGCCAG ACAGGTCGCT TACGATCCTC ATCCTTATTA TGTAATAGAG
TTGAGCAGTT TTCAACTGGA CAACATGTAC GACTTCAGGG CTAATGTGGC CATTCTGCTC
AATATTACAC CGGATCATTT AGATCGATAC GATCACCGAT TCGAGCTTTA TGCAGAAGCG
AAAATGAGAA TCACTCGGAA TCAGCAACCC GAGGATTGCT TCATCTACTG GGAGGATGAT
CCTTTTATCA GCCGATGGGT AGCCGAACAT CCTCCTGTAG CCCGTCTTCT ACCGTTCGCA
ATGGAAGCTC GAACGGATAA TACAACTGCT TGGATCAATG AAAAGAACGA ATTGGTTGTC
ATGAATCTTA ATTCACCTTT TGTTATGGAT GAGGAACTTT TAGCTCTGTC CGGCATGCAC
AACAGGCACA ATGCTATGGC AACTGCCATT GCTGCCAAAG CTATGGATAT TAAGAATGAG
GCTATTCGAG AAGCCTTGCA GGATTTCAAG AATGTACCGC ATCGACTGGA AAAGATTGCT
CGCGTAAAGG GTGTCGATTA TATCAATGAC TCCAAAGCTA CGAACGTAAA TTCTACCTGG
TATGCTCTAG AGAGCATGAA AACTAGAGTA ATACTCATTC TCGGGGGGAC AGACAAAGGC
AATGACTATA CAGATATAGA GAATCTGGTA TTGTCTAAAG TCGATGGACT GATCTTTTTG
GGCATAGATA ATGAGAAACT CCACAAATTC TTCGATGGCA AGATCTCGCG GATTGCAGAT
GCATGCTCGA TGCATGAAGC TGTTTCTTTA GCATACAAGA TGGCATCCAA AGGTGATACG
GTACTCCTTT CTCCAGCTTG TGCCAGTTTC GATCTTTTCC AAAACTACGA AGATCGTGGC
GATCAGTTTC GGAAAGAGGT ATTAAATCTA TGA
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| Protein sequence | MDRLKYDIVV LGAGESGVGA ALLAQAKGLH VFVSDYGKIA PKYKEELNRY AIPYEEGRHT
EAIILEAKEI IKSPGIPDTA PIIRQAVAKE IGIVSEIEFA GRYTDAFMVC ITGSNGKTTT
TMWLYHTLCK AGLDVGLAGN VGFSLARQVA YDPHPYYVIE LSSFQLDNMY DFRANVAILL
NITPDHLDRY DHRFELYAEA KMRITRNQQP EDCFIYWEDD PFISRWVAEH PPVARLLPFA
MEARTDNTTA WINEKNELVV MNLNSPFVMD EELLALSGMH NRHNAMATAI AAKAMDIKNE
AIREALQDFK NVPHRLEKIA RVKGVDYIND SKATNVNSTW YALESMKTRV ILILGGTDKG
NDYTDIENLV LSKVDGLIFL GIDNEKLHKF FDGKISRIAD ACSMHEAVSL AYKMASKGDT
VLLSPACASF DLFQNYEDRG DQFRKEVLNL
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