Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0538 |
Symbol | |
ID | 2552343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 589282 |
End bp | 590670 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637149306 |
Product | outer membrane efflux protein |
Protein accession | NP_904831 |
Protein GI | 34540352 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGGT TTTCAAATCA TTGGCCCTGC ATCCTCGTGG GGTTTGTACT CTGGTTTGTA TCGGCGAGTC GGACTGTGGC ACAAAACGCC TCCGAAACGA CGGTATCGTA CGATACGGAT ACCGCCGTAC TCTCCGAAGC CGATGTGCTT CGGATCGCTC TTAGTGAGAA TGCCACAGTG AAAGTGGCCG ATATGGATGT GCGCAAACAG GAATATGCAC GTAGGGCAGC ACGTGCCGAT CTCTTCCCGA AAGTAGACCT CAATGGCGTT TACAGCCATA CGCTAAAGAA GCAGGTCTTA TATATAGATA TGCCCGGTTT CAGCAGTAGC GAAGGTATCG AAATGGGGCG TACACACAAT ACGCAAGGAG GGGTGAACGT CTCCATGCCA TTGGTGTCGG CACAGCTTTG GAAAAGCATT GCCATGACCG GAGAACAGCT CGATCTGGCT CTGGAGAAAG CTCGCAGCTC CCGAATCGAT TTGGTGGCAG AGGTGAAGAA GGCTTACCTC AGTGTATTGT TGGCCGAGGA CTCTTATGGC GTATTCAAGC GCAGCTATGA CAATGCTCTG GCCAATTATA AGAACATATC CGACAAGTTC GATCGTGGAC TTGTGGCCGA GTATGATAAG ATTCGAGCCA ATGTACAGGT ACGCAACATC GAGCCTAACC TCTTGCAAGC GCAGAACTCC GTAGCCCTTG CTCTCTGGCA GCTCAAGGTC CTGATGAGCA TGGAAGTGGA AACTCCGATC AGACTCTCCG GTTCATTGTC CGACTATAAA GAACAAGTCT ATACCGGCTA TTTTGCCGCC GATACGCTTA TTTCCAACAA CTCCTCCCTG CGTCAGCTCG ATATACAGCG TCGTCTGGCT GTCAGTGCAG ACAAGCTGAA CAAGTACAGC TTCCTGCCTA CACTCAATCT GGGAGGGCAG TACACCTATT CGCTCAACAG CAACGACATC AAATTCTGGG GCGAGGGACA ACGCTGGACG CCTTTCTCCA CCATATCGCT CAGCCTGTAC ATTCCTATAT TCAATGGAGG CAAACGTCTG TACAACGTGA AGCAAAGTGC TTTATCGATC CGTCAGATCG ATCTGCAACG ACGCCACATA GAGCAATCCA TCCGAATGGG AATCAAGAAC CAAAATGACC GTCTGCGTAC CTGTATGCAG AGATTTGTGG CCTCGGAAGA GGCTGTCCGA AGTGCAGAAA AGGGCTATCA GATAGCAGAG AAACGCTATC AGACAGGCGA AGGCACTCTC GTCGAGCTCA ACGATGCCGA TGTGGCTCTT TTGCAGGCTC GACTCAATTA TAATCAGGCC ATATTCGACT TTATGACCGC AAAGGCCGAA TTGGACAAGA TGAACGGCAT GGGGATTCCC GAACAATGA
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Protein sequence | MNRFSNHWPC ILVGFVLWFV SASRTVAQNA SETTVSYDTD TAVLSEADVL RIALSENATV KVADMDVRKQ EYARRAARAD LFPKVDLNGV YSHTLKKQVL YIDMPGFSSS EGIEMGRTHN TQGGVNVSMP LVSAQLWKSI AMTGEQLDLA LEKARSSRID LVAEVKKAYL SVLLAEDSYG VFKRSYDNAL ANYKNISDKF DRGLVAEYDK IRANVQVRNI EPNLLQAQNS VALALWQLKV LMSMEVETPI RLSGSLSDYK EQVYTGYFAA DTLISNNSSL RQLDIQRRLA VSADKLNKYS FLPTLNLGGQ YTYSLNSNDI KFWGEGQRWT PFSTISLSLY IPIFNGGKRL YNVKQSALSI RQIDLQRRHI EQSIRMGIKN QNDRLRTCMQ RFVASEEAVR SAEKGYQIAE KRYQTGEGTL VELNDADVAL LQARLNYNQA IFDFMTAKAE LDKMNGMGIP EQ
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