Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0532 |
Symbol | |
ID | 2552348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 581339 |
End bp | 582238 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637149297 |
Product | hypothetical protein |
Protein accession | NP_904826 |
Protein GI | 34540347 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.707373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAGAG GACAATCGTT AGCTTTGCAG TCCAATCGAA ACAGACCTTA TATGATACGC ATCATACAAC CGATCTTGCG AAGCGAGCGA AGACGCAAAT TGGGACGCGA ATACTTCATT CTTCACCGCA AGTTGTCGGA CTGCTTTTCT TCGATCAAAT GGGCTTTACC AGCGAAGGGA GACAATTCTC ATGGCTGTTC CTATCCGGTC ATGGAGCATC GGTCGCTCAT TATGCGCCGG CTGAAGGATG TGGATATGTA CATGCAAGAG AACAAACGAA CCAATCTGCG ACTGGCCATC TCCAAGCTGC ACGGTATGAT CATACGTCCC GGAGAGACCT TCTCCGTCTG GCGTCATGTC GGTCGTCCGA CTGCTCGCAA GGGGTACCTC GAAGGTTTGG TATTGAGTCA GGGGAAGATC GGCAAAGGAG TGGGAGGCGG TCTCTGCCAG CTTGGCAACC TGCTCTTTTG GATGTTTGCT CATACGCCGC TGTCCATAGT CGAGCGACAC AGGCACAGCT TCGATGTTTT TCCTGACATA AATCGCAGTA TTCCGTTCGG AGCAGGAGCT ACGCTTTCGT ATAACTATAT CGACCTTCGG GTCAGCAACA ATACGCCGCA CACCTACAGG CTGGAACTCT GGCTGGACGA TACGCACCTG AACGGACGGA TCAGCTCCGA TACGGAGCAG AGGGATCGTT ATCGCATCGA GGAGACGGAT CACCGCATAG AGCATCAGAG TTGGGGTGGC TATACGCGAC ACAATAAGCT GGTACGTATC GTCACTCGTG CCGATGGCAG CGAATATACC GAGCCGTTTG TGGAGAATCA TGCCATCATG ATGTACAATC CTTTGCTCTC CCCTCCCCAA AATGGTGCAA GCACCTCTTT CCAAAGGTGA
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Protein sequence | MERGQSLALQ SNRNRPYMIR IIQPILRSER RRKLGREYFI LHRKLSDCFS SIKWALPAKG DNSHGCSYPV MEHRSLIMRR LKDVDMYMQE NKRTNLRLAI SKLHGMIIRP GETFSVWRHV GRPTARKGYL EGLVLSQGKI GKGVGGGLCQ LGNLLFWMFA HTPLSIVERH RHSFDVFPDI NRSIPFGAGA TLSYNYIDLR VSNNTPHTYR LELWLDDTHL NGRISSDTEQ RDRYRIEETD HRIEHQSWGG YTRHNKLVRI VTRADGSEYT EPFVENHAIM MYNPLLSPPQ NGASTSFQR
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