Gene PG0530 details

Gene Information

• Locus tag: PG0530
• Symbol: carB
• ID: 2552392
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 575869
• End bp: 579096
• Gene Length: 3228 bp
• Protein Length: 1075 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 637149295
• Product: carbamoyl-phosphate synthase, large subunit
• Protein accession: NP_904824
• Protein GI: 34540345
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATAGACA AGAGCAAAAT AAAGAAGGTA CTGCTGCTCG GTTCGGGCGC ACTTAAAATA 
GGGGAAGCCG GTGAATTCGA TTATTCCGGT TCTCAGGCGT TGAAAGCCAT TCGCGAAGAA 
GGTATCAGGA CGGTGCTCGT CAATCCGAAT ATTGCCACAG TCCAAACGTC CGAAGGGATA 
GCCGACGAAA TATATTTCCT GCCCGTAACG CCTTATTTCG TAGAGAAAGT TATTGAGAAA 
GAACGTCCCG ATGGGATTCT CTTGGCATTC GGTGGTCAGA CAGCTCTGAA CTGTGGAGTC 
GAATTGTATC GAAGCGGTGT CTTGGAAAAG TATGGGGTAG AAGTACTCGG TACGCCTGTA 
CAAGCTATCA TGGATACCGA GGATCGCGAA CTTTTTGTTC GCAAGCTCGA TGAGATCAAC 
GTGAAAACGA TCCAGAGCCA AGCTGTAGAA AGCGTGGAGG AAGCGCGCAA AGCTGCTCGC 
GAATTGGGCT ATCCCGTCAT TGTTCGCGCT GCTTATGCCT TAGGCGGTTT GGGTAGCGGT 
TTCTGCGACG ACGAAGACGA ACTGAATATC CTTTGTGAAA AAGCTTTTTC TTTCAGCCCT 
CAAGTTCTTG TGGAGAAGAG CCTCAAAGGC TGGAAAGAGG TAGAATATGA AGTTGTACGC 
GACCGTTTCG ACAATTGTAT CACCGTGTGC AATATGGAGA ATTTCGATCC TCTCGGCATC 
CATACGGGAG AGAGTATCGT CATCGCTCCC TCGCAGACAC TCACCAACAG TGAATATCAC 
AAACTCCGCG AGCTGGCCAT TCGGATCATT CGCCACATCG GTATTGTCGG AGAATGCAAT 
GTGCAGTATG CACTCGATCC CGATAGCGAG GACTACCGCG TCATCGAAGT AAATGCTCGT 
CTGAGCCGTT CGTCTGCTTT GGCATCCAAG GCAACGGGTT ATCCTCTCGC TTTCGTCGCT 
GCCAAGTTAG GGTTGGGTTA CGGCTTGTTC GACCTCAAAA ACTCGGTGAC ACAGACTACT 
TCGGCTTTCT TCGAGCCGGC TCTTGACTAT GTAGTCTGCA AAATTCCCCG TTGGGACTTG 
GGTAAATTCC ACGGTGTAAG TCGCCAATTA GGTTCTTCTA TGAAATCTGT CGGAGAGGTT 
ATGGCCATCG GTCGCACCTT CGAGGAGGCT ATCCAGAAGG GATTGCGTAT GATCGGTCAG 
GGCATGCACG GTTTCGTAGA GAACAAAGAG CTCGTGATTC CCAATATAGA CAAGGCACTG 
AATGAGCCGA CCGACAGACG CATTTTCGTC ATAAGCAAGG CATTTCGTCA AGGTTACACG 
GTAGATAAAA TACATGAACT GACTAAGATC GATCGCTGGT TTCTGGAAAA ACTCTATGGT 
ATCGTTACCC TTGCAGAGGA AATGGAAGAG TTCGACAAGC TCGAAGATCT TTCACCTGCT 
CTTTTGGCTG AGGCCAAATT GCGCGGGTTT TCCGATTTTC AGGTAGCTCG TGCTGTACTC 
AAGCCGGATG CTACTTCGAT GGAAAGCGCA ACCAATCAGG TACGTGCCAT GCGAAAGGAG 
CTGGGAATCC TACCGGTGGT TAAGCGTATC GATACGCTTG CAGCGGAGTA TCCTGCTCAT 
ACGAACTATC TCTACCTGAC GTATAGTGGC GATCGTCATG ATGTAGCCTA TGAGAACGAC 
AAGCGTTCCG TAGTTGTACT CGGTTCGGGT GCATACCGTA TCGGTAGCTC GGTGGAGTTT 
GACTGGTGTG GTGTCAATGC TCTGGCTACC ATCCGTAAGG AAGGCTATCG CTCCGTCATG 
ATCAACTATA ATCCCGAGAC GGTGAGTACG GACTATGATA TTAGTGACAG GCTCTACTTC 
GACGAACTGA CATTCGAGCG CGTAATGGAT ATTCTTGAAC TGGAAAATCC TCATGGCGTT 
ATTGTTTCCA CAGGGGGACA AATCCCGAAC AACCTTGCAG TTCGTCTCGA TGAACAGCAT 
GTGCCCATCC TGGGTACTTC CGCACAGAGT ATTGACAATG CCGAGGATCG TCATAAATTC 
TCAGCCATGT TGGATAAATT GGGTATCGAT CAGCCCCGTT GGCAGGAGCT TTCTTCGATG 
GACGACATTG ACGGATTCGT TGCCGAAGTC GGTTATCCCG TTTTGGTTCG TCCGAGCTAC 
GTCCTTTCCG GTGCAGCTAT GAATGTGTGC TCCAATGATG AAGAACTTCA TCGTTTCCTC 
GAATTGGCTG CCAATGTGTC CAAGCAACAT CCTGTCGTTG TCAGCCAGTT TATCGAGCAT 
GCCAAGGAGG TCGAGATGGA TGCCGTGGCG CGTGATGGTG AGATCATAGC CTATGCGATC 
AGCGAGCATA TCGAATTTGC AGGTGTGCAC TCGGGTGATG CCACTATCCA GTTCCCTGCA 
CAGAAATTGT ATGTAGAGAC TGTCCGCCGA ATCAAACGGA TCAGTCGTGA GATAGCAAAA 
GCTCTGAAAA TATCAGGCCC CTTCAATATC CAGTTCCTTG CCAAGGGTAA CGATATTAAG 
GTGATCGAGT GCAATTTGCG TGCTTCGCGC AGCTTCCCCT TCGTGAGCAA GGTGCTCAAG 
ATCAACTTTA TCGAATTGGC CACACGTATC ATGCTCGGCC TGCCGGTAGA GAAGCCGAAC 
AAGAGCGAGT TCGATCTGGA CTATGTCGGT ATCAAGGCCT CGCAGTTCTC CTTCACCCGC 
TTGCAAAAGG CCGACCCTGT CTTGGGTGTG GATATGACCA GTACCGGAGA GGTAGGCTGT 
ATAGCGGATG ATACGGACGA GGCTGTACTG AAGAGTATGC TTTCGGTAGG CTATCGCATT 
CCTCAGAAGA GTGTACTCTT ATCTACCGGA GGCTATAAGC AAAAAGTGGA TATGCTTGAT 
GCTACGACCA TGCTTGCAGC CAAAGGGTAT AAGATCTATG CCACGGAGGG AACGCACAAT 
TTTCTCAGAG AGAACGGAAT CGAATCGACC AAAGTGTTCT GGCCGAGCGA GAACGGACAG 
CCTCAAGCTC TGGAATTGCT TCACAATCGT GAGATCGAGC TTGTGGTCAA TATCAACAAG 
AATCTTACCG CAGGAGAACT GACCAATGGT TATAAACTCC GCCGTGCAGC CATCGACCTG 
AATATCCCGC TGGTTACAAA TGCTCGTTTG GCTTCTGCCT TCATCACGGC ATTCTGCAAA 
CATAGCCCTG AGGATATTCG CATCAAGAGT TGGGCTGAAT ACAAGTAG 

 

Protein sequence

MIDKSKIKKV LLLGSGALKI GEAGEFDYSG SQALKAIREE GIRTVLVNPN IATVQTSEGI 
ADEIYFLPVT PYFVEKVIEK ERPDGILLAF GGQTALNCGV ELYRSGVLEK YGVEVLGTPV 
QAIMDTEDRE LFVRKLDEIN VKTIQSQAVE SVEEARKAAR ELGYPVIVRA AYALGGLGSG 
FCDDEDELNI LCEKAFSFSP QVLVEKSLKG WKEVEYEVVR DRFDNCITVC NMENFDPLGI 
HTGESIVIAP SQTLTNSEYH KLRELAIRII RHIGIVGECN VQYALDPDSE DYRVIEVNAR 
LSRSSALASK ATGYPLAFVA AKLGLGYGLF DLKNSVTQTT SAFFEPALDY VVCKIPRWDL 
GKFHGVSRQL GSSMKSVGEV MAIGRTFEEA IQKGLRMIGQ GMHGFVENKE LVIPNIDKAL 
NEPTDRRIFV ISKAFRQGYT VDKIHELTKI DRWFLEKLYG IVTLAEEMEE FDKLEDLSPA 
LLAEAKLRGF SDFQVARAVL KPDATSMESA TNQVRAMRKE LGILPVVKRI DTLAAEYPAH 
TNYLYLTYSG DRHDVAYEND KRSVVVLGSG AYRIGSSVEF DWCGVNALAT IRKEGYRSVM 
INYNPETVST DYDISDRLYF DELTFERVMD ILELENPHGV IVSTGGQIPN NLAVRLDEQH 
VPILGTSAQS IDNAEDRHKF SAMLDKLGID QPRWQELSSM DDIDGFVAEV GYPVLVRPSY 
VLSGAAMNVC SNDEELHRFL ELAANVSKQH PVVVSQFIEH AKEVEMDAVA RDGEIIAYAI 
SEHIEFAGVH SGDATIQFPA QKLYVETVRR IKRISREIAK ALKISGPFNI QFLAKGNDIK 
VIECNLRASR SFPFVSKVLK INFIELATRI MLGLPVEKPN KSEFDLDYVG IKASQFSFTR 
LQKADPVLGV DMTSTGEVGC IADDTDEAVL KSMLSVGYRI PQKSVLLSTG GYKQKVDMLD 
ATTMLAAKGY KIYATEGTHN FLRENGIEST KVFWPSENGQ PQALELLHNR EIELVVNINK 
NLTAGELTNG YKLRRAAIDL NIPLVTNARL ASAFITAFCK HSPEDIRIKS WAEYK