Gene PG0526 details

Gene Information

• Locus tag: PG0526
• ID: 2552356
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 570886
• End bp: 572769
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637149292
• Product: putative inner membrane protein translocase component YidC
• Protein accession: NP_904821
• Protein GI: 34540342
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0706] Preprotein translocase subunit YidC
• TIGRFAM ID: [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain; [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.710508
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATAAAA ATACAGTTAT AGGTTTAGTT CTGATCGGAC TGGTGATCTT TGGGTTTTCA 
TGGCTCAATC GTCCCGATCC GCAGGAAATA GAAGCGCAGC GTAAGGCTGC GATAGAAGCA 
GCTCGGCAGG ATTCCATAGC GAAAGCCGAA GCCGAACTCC TTGCAGCCCG AACCCAGGGG 
GCCACGCCCG ATTCGATCAA ACAGGCAGCC GGATATAATC AGTATGGACT ACTGGCAGCC 
GCGACAGCCG GTGCAGAGGA GCAGGTGGAG CTGGCCAACG GCAAGATCGC TCTCAAGCTC 
AGTACCAAGG GGGGAGCTAT CCGGGAAGTT TTGCTTCGGG ACTATAAAAC GCACGATGGC 
AAACCTCTCT ATCTTTTCCG AGAAGGAGAG TCGGATTTCA ACCTGCCTCT GCGAACCGTG 
GACAACAGGC TGGTCGATAC ACGCGATCTG TACTTTTCTC CCATCAGCCG AACGGATTCC 
TCCGTTGTGA TGCGTCTGGC TGTGGACAGT GCTTCTTATC TTGATTTGGC CTACGTCCTC 
CTTCCGGATG ACTACCGCTT GCGAATGACG GTAAGCGGAC AGAACTTGCA ATCGCTTTTC 
CCTGCCAATA TGACGATGCA GGACCTAGAA TGGTCGCAGC GCATTCGCCG TCAGGAGAAA 
TCATGGAAGT TTGAGAATCA ATATACCTCT ATTTATTATA AGTATTCGGG CGATGAGGTG 
GATCGTCTGA GCGACAGTAA GCAGGAAGAC AAGAAGACTT TGGAGGAGCC GTTGCATTGG 
GTGTCTTTCA AGGATAAGTA CTTCGCCTCC GTTTTGGTGT GCGATAGTTA TTTCGAAAAC 
AATAAACTGG CGCAGAAGAC GGCAGCAGCC GGGTCCGACT ATCTGAAGAA TTGTACCATG 
TCTGCCACCT TTCCGTTGGA TGTTCGCTCG GGAACAAAAG CCAGATTCAC TTTCTTCTTC 
GGCCCGCTCA AATACAATAT GCTACGCGCT TACGACAAAG GGATGAAAGC CGAGGACAAC 
CTCGATCTCG ATCACTTGGT CTACTTGGGT GCCAGTATCT TCCGATGGAT CAATCGTTAT 
ATGATCATTC CGGCCTCCAC ATTCCTGCAG CAGTATTTTA GCAACTGGGG GCTGATCATT 
CTTTTGCTCA CGCTGGGGAT CAAACTCCTC ATCTCTCCTC TCGCTTACAA GGGGTATCTC 
TCCTCTGCCA AAATGCGATT GCTACGGCCG CAGGTACAAG AGATCAATGC CAAGTACCCG 
GGCAAGGATC AGGAATCCAT GATGAAGCGG CAGTCTGCTA CCATGAATCT CTATCGTGCG 
GCCGGTGCAG GTCCGATGAG TGGGTGCTTG CCTATGCTCT TGCAGTTCCC TTTCCTCATA 
GCCATGTACA TGTATTTCCC TACGACTATC GACATTCGTC AGCAGAGTTT CCTCTGGGCG 
GAAGACCTCT CCTCCTATGA TGCTGTTTTC AGCTGGACGG CCGATATTCC TTTGTTGTCT 
CAGTTCTATG GCAATCACGT CAGTCTCTTC TGCCTGCTCA TGTCCATTTC CAATATCCTC 
TATATCCGCT ATACGATGAA TCAGTCGGAT ACGGGACAGG AGGGTATGGC TATGCTCAAA 
TGGATGCCTT ATATCACTAC GGTGATGTTC CTGTTCTTCT TCAATCAGAA TGCATCGGGG 
CTTTGCTACT ATTATTTCCT CTCTTCTATT ATTACTGTCA TCCAGTACAT GTCTTCACGT 
TTTATCATCA ACGAAGAGAA GCTGATGGCT AAGTTGGAAG CGAACAAGAC GAAGCCACGA 
AAGAAATCGA AATGGATGGC AAGACTCGAA GAGGCACAGC GGCAGCAGGA AGCGATGCGA 
CGCCAACAAC AAAAGAGAAA ATAG 

 

Protein sequence

MDKNTVIGLV LIGLVIFGFS WLNRPDPQEI EAQRKAAIEA ARQDSIAKAE AELLAARTQG 
ATPDSIKQAA GYNQYGLLAA ATAGAEEQVE LANGKIALKL STKGGAIREV LLRDYKTHDG 
KPLYLFREGE SDFNLPLRTV DNRLVDTRDL YFSPISRTDS SVVMRLAVDS ASYLDLAYVL 
LPDDYRLRMT VSGQNLQSLF PANMTMQDLE WSQRIRRQEK SWKFENQYTS IYYKYSGDEV 
DRLSDSKQED KKTLEEPLHW VSFKDKYFAS VLVCDSYFEN NKLAQKTAAA GSDYLKNCTM 
SATFPLDVRS GTKARFTFFF GPLKYNMLRA YDKGMKAEDN LDLDHLVYLG ASIFRWINRY 
MIIPASTFLQ QYFSNWGLII LLLTLGIKLL ISPLAYKGYL SSAKMRLLRP QVQEINAKYP 
GKDQESMMKR QSATMNLYRA AGAGPMSGCL PMLLQFPFLI AMYMYFPTTI DIRQQSFLWA 
EDLSSYDAVF SWTADIPLLS QFYGNHVSLF CLLMSISNIL YIRYTMNQSD TGQEGMAMLK 
WMPYITTVMF LFFFNQNASG LCYYYFLSSI ITVIQYMSSR FIINEEKLMA KLEANKTKPR 
KKSKWMARLE EAQRQQEAMR RQQQKRK