| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0520 |
|---|
| Symbol | groEL |
|---|
| ID | 2551465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | - |
|---|
| Start bp | 563708 |
|---|
| End bp | 565345 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637149286 |
|---|
| Product | chaperonin GroEL |
|---|
| Protein accession | NP_904815 |
|---|
| Protein GI | 34540336 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | [TIGR02348] chaperonin GroL |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.156015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG AAATCAAATT CGATATGGAA TCTCGCGACC TTCTGAAGAA GGGCGTAGAT
GCACTGGCAA ATGCCGTTAA AGTTACCCTC GGGCCGAAAG GTCGTAATGT TATCCTTAGC
AAGACGTACG GAGCTCCGCA CATTACCAAG GACGGTGTGA GCGTAGCGAA AGAGATAGAA
TTGGAGTGCC CGTTCGAGAA CATGGGTGCC CAGTTGGTGA AAGAAGTAGC CTCCAAGACC
AATGACGATG CCGGTGACGG TACGACTACG GCTACGATCC TCGCCCAGAG CATTATCGGC
GTGGGTCTGA AGAACGTTAC GGCAGGAGCC AATCCGATGG ATTTGAAGCG TGGTATCGAC
AAGGCTGTAA AGGCTGTGGT AACTCACATT GCAGGTATGG CTAAGGAAGT GGGCGACGAC
TTCCAGAAGA TCGAGCACGT AGCCAAGATC TCTGCCAACG GAGACGAAAA CATCGGTAGC
CTCATTGCCG AAGCCATGCG CAAGGTGAAG AAAGAAGGCG TTATCACGGT AGAAGAAGCC
AAGGGAACCG ACACTACGGT AGAAGTGGTG GAAGGTATGC AGTTCGACCG CGGCTACATC
TCTCCCTACT TCGTAACGAA CACGGATAAG ATGGAGGTGC AAATGGAAAA TCCTTTCATC
CTCATCTACG ACAAGAAAAT ATCCGTCCTG AAAGAGATGC TCCCGATCCT CGAACAAACG
GTTCAGACGG GCAAGCCCCT CCTCATCATT GCAGAAGACA TCGACAGCGA AGCACTCGCC
ACCTTGGTTG TAAACCGTCT GCGCGGCAGC CTCAAGATCT GTGCAGTGAA GGCTCCCGGA
TTCGGCGATC GTCGCAAGGC TATGCTCGAA GACATTGCTA TCCTGACGGG CGGAACGGTT
ATCAGCGAAG AGACCGGTCT GAAGCTCGAA AATGCTACGA TGGATATGCT CGGTACAGCT
GAGAAAGTAA CGGTTGATAA GGACAATACT ACTATCGTTA ACGGAGCCGG AAACAAAGAA
GGCATCGCTT CACGTATCAC GCAGATCAAA GCTCAGATCG AGAATACGAC CAGCGACTAC
GACCGCGAAA AGCTGCAAGA ACGTTTGGCC AAGCTCGCCG GCGGTGTAGC TGTTCTTTAC
GTGGGTGCTG CCAGCGAAGT GGAAATGAAG GAAAAGAAGG ATCGCGTAGA AGATGCCTTG
AGTGCAACGC GTGCTGCAAT CGAAGAGGGT ACAGTACCCG GTGGCGGTAC GGCATACATT
CGTGCCATAG CTGCTTTGGA AGGTCTCAAG GGTGAGAACG AAGACGAAAC CACAGGTATC
GAGATCGTGA AACGCGCCAT CGAGGAGCCG CTTCGTCAGA TCGTAGCGAA CGCCGGTAAA
GAGGGTGCCG TTGTGGTACA GAAGGTGAAA GAAGGCAAGG ACGACTTCGG CTACAATGCC
CGTACGGATG TTTTCGAAAA CCTCTACACT ACCGGTGTTA TCGACCCGGC CAAAGTAACA
CGTGTAGCAT TGGAAAATGC AGCGTCTATC GCAGGTATGT TCCTGACTAC GGAGTGCGTT
ATCGCTGACA AGAAAGAAGA TAATCCTGCC GCACCGGCCA TGCCCGGAGG TATGGGAGGA
ATGGGCGGCA TGATGTAA
|
|---|
| Protein sequence | MAKEIKFDME SRDLLKKGVD ALANAVKVTL GPKGRNVILS KTYGAPHITK DGVSVAKEIE
LECPFENMGA QLVKEVASKT NDDAGDGTTT ATILAQSIIG VGLKNVTAGA NPMDLKRGID
KAVKAVVTHI AGMAKEVGDD FQKIEHVAKI SANGDENIGS LIAEAMRKVK KEGVITVEEA
KGTDTTVEVV EGMQFDRGYI SPYFVTNTDK MEVQMENPFI LIYDKKISVL KEMLPILEQT
VQTGKPLLII AEDIDSEALA TLVVNRLRGS LKICAVKAPG FGDRRKAMLE DIAILTGGTV
ISEETGLKLE NATMDMLGTA EKVTVDKDNT TIVNGAGNKE GIASRITQIK AQIENTTSDY
DREKLQERLA KLAGGVAVLY VGAASEVEMK EKKDRVEDAL SATRAAIEEG TVPGGGTAYI
RAIAALEGLK GENEDETTGI EIVKRAIEEP LRQIVANAGK EGAVVVQKVK EGKDDFGYNA
RTDVFENLYT TGVIDPAKVT RVALENAASI AGMFLTTECV IADKKEDNPA APAMPGGMGG
MGGMM
|
|---|
| |