Gene PG0514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG0514 
SymbolsecA 
ID2552320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp553019 
End bp556360 
Gene Length3342 bp 
Protein Length1113 aa 
Translation table11 
GC content47% 
IMG OID637149279 
Productpreprotein translocase subunit SecA 
Protein accessionNP_904809 
Protein GI161579531 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00876385 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGATTCA ACGAATTCAT GTCGAAGCTT TTCGGCAACA AATCGCAGCG TGACTTGAAA 
GAGGTAAAAC CTTTCGTGGA CAAAATCAAA GTTGCATATG GCGAAATCGA ACGGCTGTCA
GACGACGATC TTCGCGGACG TACAGCCATC TTGCGCCAAA AGATACAAGA CTATGTAAAA
GATGAGAGAG CAGAAATCGA CAAGCTGAAA GTCGAGGTGG AAGGCAAGGA CTTGGACGAA
CGAGAGGAGA TTTGGGCTCA AGTAGACAAG CTCGAAAAAG AGATTTTGGA CAAAATGGAA
GTCGTTTTGG ATGAAATTCT CCCCGAAGCA TTTGCTATTA TCAAAGATAC TGCTCGCAGA
TTCGCCCAAA ACGAAACTAT TCGAGTCAAA GCCACTGATC TTGATCGTGA TCTCGCAATC
AACCATGATT TCGTCTCGAT CGAGGGAGAT ACCGCCGTCT ACCAAAACCA CTGGGTGGCA
GGAGGCAATG AAATCTTGTG GGACATGATT CACTATGATG TTCAGCTCAT CGGTGGTACA
GTCTTACACA AAGGAAAAAT TGCCGAAATG GCTACCGGTG AGGGAAAGAC ATTGGTAGCT
ACCCTACCCG TATTCCTCAA TGCTCTGACT GGTAACGGCG TGCATGTAGT GACGGTCAAT
GACTACCTTT CTAAACGTGA CTCGGAATGG ATGGGGCCAC TGTATATGTT CCATGGTTTA
ACCGTGGATT GCATAGATAA GCACCAGCCC AATTCGGATG CCCGCCGCAA GGCCTATAAT
GCAGATATTA CATTTGGCAC CAATAACGAA TTCGGCTTCG ACTACTTGCG CGACAATATG
GCCACGAGTC CTAAGGACTT GGTGCAGCGT AAGCACAACT ACGCCATAGT CGACGAGGTG
GATTCCGTAT TGATCGATGA CGCCCGAACT CCTTTGATTA TTTCCGGCCC TACTCCCAAA
GGTGAAGATC AGTTGTTCGA GGAGTTTTTG CCCAATGTGG AGAAAGTTGT CGAGGCACAG
CGTAAACTTT GTTCACAATT ACTTATCGAT GCCAAGAATA AGATGGCATC TGAGGATAAG
AAAGAACAGG AAGAGGGTTC TTTGCTACTC TTTCGTTCGT TCAAGGGTCT TCCCAAAAAT
AAACAGTTGA TCAAGTATCT GAGCGAACCC GGCATCAAGA GCTCCATGCT GAAGACCGAA
GAAGCATACA TGGCTGAAAA CATGAGGAAT ATGCATTTGG TCACAGACGA ATTGTATTTC
ATCATAGATG AAAAGCGTAA TAGCGTAGAG CTTACCGAGA AAGGTATCGA CCTTCTGACG
TCCCGTACAG ATGACCCGAA ATTCTTCGTC TTGCCTGATA TTGCAGCTGA GTTATCCGCT
TTGGACAATA TGGAATCCGA TGCAGAAAAA CGTCGCGAAG CCAAGGATGA GATCATAGCC
AACTATTCGA TCAAGAGCGA GCGTGTACAT ACTGTCAATC AGTTGCTCAA AGCCTATGCC
CTCTTCGAGA AGGATGATCA ATACGTGGTC ATGGACAATA AGGTGCTCAT CGTAGACGAG
CAGACCGGAC GTATCATGGA CGGACGTCGA TATTCGGATG GCCTCCATCA GGCTATCGAA
GCCAAAGAGC ATGTGAAAGT AGAGGCTGCG ACACAGACAT TTGCAACTAT CACTTTGCAG
AACTATTTCC GCATGTATCA TAAGCTGGCA GGGATGACCG GTACTGCTGA AACTGAAGCG
GGAGAGCTTT GGGACATCTA CAAACTGGAC GTTGTAGTTA TTCCGACAAA CAAGCCTATC
GCCCGTAAGG ATATGAATGA TCGTATCTAT AAGACGGCAC GTGAAAAATA TGCAGCAGTT
ATCGAAGAGA TTGTACGTCT TGTCGAAGAG GGCAGACCTG TACTTGTCGG TACTACTTCG
GTGGAAATAT CCGAATTGTT GAGCCGTATG TTACGCTTGC GTGGCATCCA ACACAATGTA
CTCAATGCCA AATTGCATCA GAAGGAGGCC GAGATTGTAG CTCAGGCCGG TCAGAAAGGA
ACTGTTACCA TCGCAACGAA CATGGCCGGT CGTGGTACCG ACATCAAGCT CTCTGCCGAG
GTTAAGAAAG CCGGGGGTTT GGCTATCATT GGTACGGAAA GGCACGAATC CAGACGAGTG
GACAGACAGC TTCGTGGTCG TTCCGGCCGT CAGGGTGATC CCGGTTCGTC CATATTCTAT
GTTTCCCTTG AAGATCATCT GATGCGCCTC TTTGCCACAG AAAAGATTGC ATCATTGATG
GATCGTTTAG GTTTCAAGGA AGGAGAAGTG CTCGAAAACA ACATGCTGAG TAAGTCCGTG
GAGCGTGCTC AAAAGAAGGT GGAAGAGAAC AACTTCGGTA TCCGTAAACA TCTGCTTGAG
TACGATGATG TAATGAATTC GCAGCGTGAA GTCATTTATA CCCGTCGCCG TCATGCTTTG
ATGGGAGAGC GTATCGGTAT GGATGTACTC AATACCATAT ACGACGTATG TAAGGCTCTG
ATTGACAATT ATGCAGAAGC CAATGATTTC GAAGGCTTCA AGGAAGATCT GATGCGTGCA
CTCGCGATAG AATCTCCTAT CACGCAAGAA ATATTCAGAG GTAAGAAAGC AGAAGAGCTG
ACCGATATGC TTTTCGATGA AGCTTACAAG TCTTTCCAAC GTAAGATGGA TCTGATCGCA
GAAGTGGCCC ACCCTGTGGT TCATCAGGTA TTCGAGACCC AAGCCGCCGT GTACGAGCGC
ATTCTAATCC CCATTACGGA TGGTAAACGT GTCTATAACA TAGGATGCAA TTTGCGTGAA
GCGGATGAAA CTCAAGGGAA AAGCATCATC AAAGAATTTG AGAAAGCTAT CGTACTGCAT
ACTATCGATG AGTCTTGGAA AGAACATCTG CGTGAGATGG ACGAGCTTCG TAATTCCGTT
CAGAATGCCA GCTACGAAAA CAAAGATCCA CTACTTATCT ATAAACTCGA ATCTTACGAA
CTGTTCCGCA AGATGGTAGA AGCCATGAAC CGTAAGACCG TAGCGATCCT AATGCGTGCT
CGGATACCGG TACCGGAGGC TCCTTCCCAA GAAGAGCTGG AACACAGGCG GCAAATAGAA
ATCCGACATG CAGCCGAACA ACGTACGGAC ATGAGTAAGT ATCGGACACA AAAAGACGAT
ATAGAAGCCC AGCAGAAAGC ACAAAGGGAT GCGGCAAGCA GACCTCAGGG TGCAGCTGCT
CCCCAGACAC CGATAAGAAA CGAGAATAAG ATCGGGCGAA ACGATCCTTG TCCTTGCGGT
AGTGGCAAAA AGTTCAAACA GTGCCACGGG CGTAACCTGT AA
 
Protein sequence
MGFNEFMSKL FGNKSQRDLK EVKPFVDKIK VAYGEIERLS DDDLRGRTAI LRQKIQDYVK 
DERAEIDKLK VEVEGKDLDE REEIWAQVDK LEKEILDKME VVLDEILPEA FAIIKDTARR
FAQNETIRVK ATDLDRDLAI NHDFVSIEGD TAVYQNHWVA GGNEILWDMI HYDVQLIGGT
VLHKGKIAEM ATGEGKTLVA TLPVFLNALT GNGVHVVTVN DYLSKRDSEW MGPLYMFHGL
TVDCIDKHQP NSDARRKAYN ADITFGTNNE FGFDYLRDNM ATSPKDLVQR KHNYAIVDEV
DSVLIDDART PLIISGPTPK GEDQLFEEFL PNVEKVVEAQ RKLCSQLLID AKNKMASEDK
KEQEEGSLLL FRSFKGLPKN KQLIKYLSEP GIKSSMLKTE EAYMAENMRN MHLVTDELYF
IIDEKRNSVE LTEKGIDLLT SRTDDPKFFV LPDIAAELSA LDNMESDAEK RREAKDEIIA
NYSIKSERVH TVNQLLKAYA LFEKDDQYVV MDNKVLIVDE QTGRIMDGRR YSDGLHQAIE
AKEHVKVEAA TQTFATITLQ NYFRMYHKLA GMTGTAETEA GELWDIYKLD VVVIPTNKPI
ARKDMNDRIY KTAREKYAAV IEEIVRLVEE GRPVLVGTTS VEISELLSRM LRLRGIQHNV
LNAKLHQKEA EIVAQAGQKG TVTIATNMAG RGTDIKLSAE VKKAGGLAII GTERHESRRV
DRQLRGRSGR QGDPGSSIFY VSLEDHLMRL FATEKIASLM DRLGFKEGEV LENNMLSKSV
ERAQKKVEEN NFGIRKHLLE YDDVMNSQRE VIYTRRRHAL MGERIGMDVL NTIYDVCKAL
IDNYAEANDF EGFKEDLMRA LAIESPITQE IFRGKKAEEL TDMLFDEAYK SFQRKMDLIA
EVAHPVVHQV FETQAAVYER ILIPITDGKR VYNIGCNLRE ADETQGKSII KEFEKAIVLH
TIDESWKEHL REMDELRNSV QNASYENKDP LLIYKLESYE LFRKMVEAMN RKTVAILMRA
RIPVPEAPSQ EELEHRRQIE IRHAAEQRTD MSKYRTQKDD IEAQQKAQRD AASRPQGAAA
PQTPIRNENK IGRNDPCPCG SGKKFKQCHG RNL