Gene PG0502 details

Gene Information

• Locus tag: PG0502
• Symbol: smpB
• ID: 2552299
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 541599
• End bp: 542060
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637149267
• Product: SsrA-binding protein
• Protein accession: NP_904797
• Protein GI: 34540318
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.237827
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAAGAGA AAATACAGAA GAATATCCTC ATAAAGAACA AACGTGCCAC TTTCGATTAC 
GAGATTTTGG ACGTTTACAC GGCGGGCATT GTATTGGTCG GTACCGAGAT CAAATCGCTC 
CGACTGGGCA AAGGCGGTTT GGTTGATACC TATTGCTACT TCCATCGGGG AGAGCTGTGG 
GTGAAGAATA TGTACATAGC CGAATACTTC TATGGCACCT ATAACAACCA TGTGGCTCGC 
CGCGACCGTA AACTCCTCCT TAATCGCAAA GAGCTACGCA AGCTTGAGGA GGCATCCAAG 
AGCATGGGTA CCACGATAGT GCCGCTCAAG CTCTTTATCA ATGAAAGGGG ATTGGCCAAG 
CTGCAAATCG GATTGGCACG AGGGAAAAAA CAATATGACA AACGTGCATC CATCAAAGAG 
CGAGATGATC GCCGAGAGAT GGATCGTGCA TTGAAACGCT AA 

 

Protein sequence

MKEKIQKNIL IKNKRATFDY EILDVYTAGI VLVGTEIKSL RLGKGGLVDT YCYFHRGELW 
VKNMYIAEYF YGTYNNHVAR RDRKLLLNRK ELRKLEEASK SMGTTIVPLK LFINERGLAK 
LQIGLARGKK QYDKRASIKE RDDRREMDRA LKR