| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0416 |
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| Symbol | recQ-1 |
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| ID | 2551603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 455223 |
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| End bp | 457400 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637149188 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | NP_904718 |
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| Protein GI | 34540239 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.65575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTG TTCTGGCCGA AAAATTACAG CAGTATTTTG GATTTGACCG ATTCAAAGGC
AATCAGGAGG CTATCATAAG AAATGTATTA GCCGAACGAA ACACTTTTGT GCTGATGCCT
ACGGGAGGTG GGAAATCCCT ATGCTACCAA TTGCCGGCCA TGCTCATGAC CGGCACGACC
ATCGTAGTCT CTCCTCTTAT CGCTCTGATG AAGAATCAGG TGGATGCCAT GCGTAGCTTC
AGTGCCAAGG ATGGGGTCGC TCACTTTATG AATTCTTCTT TGAATAAGAC ACAGCTCGAA
CGTGTTAAGA ATGATGTACG CGATGGACTT ACCAAACTGT TGTACGTCGC TCCCGAATCA
TTGACAAAAG AAGAAAACAT TGCTTTTCTG CGTGAAATAG ATATTTCGTT TTACGCTATA
GACGAAGCCC ATTGCATATC GGAATGGGGG CATGACTTCA GGCCCGAATA CAGACGGATT
CGTCCTATCA TCAATGAGAT AGGGCCCCGA TCGATCATCG CTTTGACAGC CACGGCTACC
CCGAAAGTGC AGCATGATAT TCAAAAGAAT CTTGGGATGA TGGATGCCGA TGTATTCAAA
TCGTCTTTCA ATCGTCCCAA TCTTTTTTAT CATATACGTC CTAAAACACA GGACGTAGAT
CGTGACGTAG TCAAATACAT CCTATCCCAG CCGGGAAAGA GCGGTATTGT CTATTGCATG
AGTCGAAATA AAGTAACTAC TTTTGCCCAG GTTTTGCAGG CCAATGGGAT CAAAGCCCTT
CCCTATCATG CGGGACTTGA CGCCGGAGAG CGAGCGAGCA ATCAGGATGC TTTTCTGAAT
GAAGAGATAA GCGTGATCGT TGCCACCATT GCTTTTGGGA TGGGTATTGA CAAGCCGGAT
GTTCGCTACG TCATTCACTA TGATATGCCC AAAAGCTTGG AAGGGTATTA TCAGGAAACG
GGGCGTGCCG GTCGAGATGG AGGAGAAGGC GAATGTATTG CATTCTATCG TCCCAAAGAC
CTGCAACGTT TAGAGAAATT CATGCAAGGC AAGCCCATAT CCGAGCAGGA AATCGGGCGT
CAGCTATTGG CCGAGACTGC AGCATTTGCG GAGAGCAGAG TGTGTAGGCG CAAGCTGCTT
CTCCACTATT TTGGAGAGGA CTATACTCAG GAAAACTGCG GTGCATGTGA TAATTGTACG
AGTACGTATA AGCAAGTGGA AGCAAAGGAA CTATTGTTAA ACGTTTTGGA AACAGTTTCT
GCTTTGAAGG AACAGTTCAA AACGGAGTAT GTCGTTAATG TATTGATGGG CGAATTGACT
CCTGATATAG AGTCATTCGG ACATCAGGAT TTAGAGGTCT TCGGTATCGG AAGCGATGAA
ACCGAGACAA CATGGACAGC CGTCATCAGA CAAGCACTGC TTTCCGGCTA TTTGAGTCGG
GACATCGAAA ATTATGGTCT GCTGAAAGTG ACAGCCAAAG GCAAGAAGTT TGCCCTCAAA
CCTGTTTCTT TCAAGATCGT CGATGAGAAC GAAGAGGACG AGGATGACGA TGCTCCTAAG
GTGGGAGGGC GAGGTTCCGG TGGGGCCATG GATCCGGTCC TGTTCGCCAT GATGAAAGAC
CTCAGAAAGA AATTGGGTGC ATCTCTCAAG TTGCCTCCCT ACGTTATCTT CCAAGATCCC
TCATTGGAGG CTATGGCTAC GTTCTATCCC GTTACGATCG AAGAGCTGCA GAATATTCCC
GGCGTGGGTG TCGGCAAGGC TACTCGCTAT GGGAAAGAAT TCCTCGATCT GATCCGTCGT
CACGTAGAGG AAAACGAGAT CGAACGTCCG GAGGATATGC GTGTACGTAC ACTCGCCAAC
AAATCGAAGA TGAAAGTCTC CATCGTTCAG CAAATCGATC GTAAAGTAGC TTTGGACGAT
ATAGCGGTGA GCCATGGATT GGATTTTCCG GAATTGCTGT CAGAAGTCGA GACGATAGTC
TACTCCGGTA CTCGAATCAA TATCGACTAC TTCATCAACG AGGTCATGGA CGAGGATCAT
TTGGAAGATA TATTCGAGTA TTTCAAAGAA TCCACGACAG ACTCTTTGGA GGAGGCTATG
CAAGAACTCG GTAAGGACTA TTCGGAGGAA GAGATTCGTT TGGTACGGAT CAAGTTCTTA
TCCGAAATGG CAAACTAA
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| Protein sequence | MDIVLAEKLQ QYFGFDRFKG NQEAIIRNVL AERNTFVLMP TGGGKSLCYQ LPAMLMTGTT
IVVSPLIALM KNQVDAMRSF SAKDGVAHFM NSSLNKTQLE RVKNDVRDGL TKLLYVAPES
LTKEENIAFL REIDISFYAI DEAHCISEWG HDFRPEYRRI RPIINEIGPR SIIALTATAT
PKVQHDIQKN LGMMDADVFK SSFNRPNLFY HIRPKTQDVD RDVVKYILSQ PGKSGIVYCM
SRNKVTTFAQ VLQANGIKAL PYHAGLDAGE RASNQDAFLN EEISVIVATI AFGMGIDKPD
VRYVIHYDMP KSLEGYYQET GRAGRDGGEG ECIAFYRPKD LQRLEKFMQG KPISEQEIGR
QLLAETAAFA ESRVCRRKLL LHYFGEDYTQ ENCGACDNCT STYKQVEAKE LLLNVLETVS
ALKEQFKTEY VVNVLMGELT PDIESFGHQD LEVFGIGSDE TETTWTAVIR QALLSGYLSR
DIENYGLLKV TAKGKKFALK PVSFKIVDEN EEDEDDDAPK VGGRGSGGAM DPVLFAMMKD
LRKKLGASLK LPPYVIFQDP SLEAMATFYP VTIEELQNIP GVGVGKATRY GKEFLDLIRR
HVEENEIERP EDMRVRTLAN KSKMKVSIVQ QIDRKVALDD IAVSHGLDFP ELLSEVETIV
YSGTRINIDY FINEVMDEDH LEDIFEYFKE STTDSLEEAM QELGKDYSEE EIRLVRIKFL
SEMAN
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