| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0401 |
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| Symbol | |
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| ID | 2551571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Porphyromonas gingivalis W83 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002950 |
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| Strand | - |
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| Start bp | 437855 |
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| End bp | 439396 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637149177 |
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| Product | phosphodiesterase |
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| Protein accession | NP_904707 |
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| Protein GI | 34540228 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATAG GAACACTTTT ATTATTTACT TTTTTGGGGC TTGTAGCCGG TGCCACTGCC
GTATGGCTGA TCACGCGGAC ACTGCTCAAG CAAAGGACAG AGGGGATTCT CGCCGAGGCT
CGCCGTGAAG CCGAGGTAAT CAAGCAGAAG AAGCTCCTCG AAGTGAAAGA GAAATTTCTC
CAACTGAAAG GCGACCTGGA AAAGCAGGTG GCACAGCGCA ATAGCAAGCT CCAATCGGTG
GAGAGCAAAC TCAAAAGCCG CGAACAAACC CTCAACCAAC GTCAGGAAGA TATAACGAAG
AAGGGGCAGG AAATGGATTT GATGCGTGAG AATCTGACTG CTCAACTCTC TGTGATTGAA
AAGAAAAAGA CGGAACTCGA CGAGCTGAAA ACTCGCGAAC AGGCTCATCT GGAGTCTCTG
AGCGGACTCT CCGCTGCCGA GGCTAAAGAC AGACTGGTGG AAAGCCTCAA AGATGAAGCC
AAAGGACAAG CCTCTGCATA CGTCAATGAG ATTATCGAAG AGGCCAAGAT GACTGCCAAC
AAAGAGGCCA AGCGAATCGT CATCCAATCC ATCCAGCGCG TGGCTACGGA AACGGCTATC
GAAAACTCCG TGACCGTCTT CCATATCGAA AGCGACGAGA TCAAGGGGCG CATCATCGGC
CGAGAGGGTC GCAACATCCG TGCATTGGAG GCTGCTGCCG GTATAGAGAT CATTGTAGAC
GATACGCCGG AAGCGATCGT CTTATCGGGA TTCGATCCGG TGCGTCGTGA GATAGCGCGT
CTGGCACTGC ATCAGTTGGT ACAGGATGGA CGTATCCACC CGGCACGCAT AGAAGAGGTG
GTATCCAAAG TAAGAAAACA GGTGGAAGAA GAGATCATCG AGACGGGCAA ACGGACGGTG
ATCGACCTTG GAATCCACGG TCTGCATCCG GAACTGATCC GTCTGATCGG TAAGATGAAG
TATCGCTCTT CCTATGGGCA GAATCTCTTG CAGCATTCGC GTGAGACAGC TAACCTCTGT
GCCATAATGG CCAGCGAATT GGGGCTGAAT CCGAAAAAAG CCAAACGCGC CGGTCTGCTG
CACGACATCG GCAAGGTGCC CGACGATGAG CCGGAATTGC CACACGCTCT CTTAGGCATG
AAGCTCTGTG AGAAGTTCAA AGAGAAACCC GACATATGCA ACGCCGTGGG AGCGCACCAC
GATGAGGTGG AAATGATGTC CCTCATAGCT CCTATCGTAC AGGTGTGCGA CGCCATTAGC
GGCGCGCGTC CGGGAGCACG CCGTGAGATC GTGGAAGCCT ATATCAAGCG TCTGAATGAT
CTGGAGCAAC TCGCCATGTC CTATCCGGGC GTTATCAAGA CCTATGCTAT TCAGGCCGGC
CGCGAACTCC GTGTGATCGT CGGTGCCGAC AAGACGGACG ATGCCTCGGT GGAAACGCTC
TCGAACGAAA TAGCCAAAAG AATCCAGGAC GAGATGACCT ACCCCGGACA AGTGAAGATC
ACAGTGATCC GCGAATCTCG CTCCGTCAGC TACGCCAAAT AA
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| Protein sequence | MGIGTLLLFT FLGLVAGATA VWLITRTLLK QRTEGILAEA RREAEVIKQK KLLEVKEKFL
QLKGDLEKQV AQRNSKLQSV ESKLKSREQT LNQRQEDITK KGQEMDLMRE NLTAQLSVIE
KKKTELDELK TREQAHLESL SGLSAAEAKD RLVESLKDEA KGQASAYVNE IIEEAKMTAN
KEAKRIVIQS IQRVATETAI ENSVTVFHIE SDEIKGRIIG REGRNIRALE AAAGIEIIVD
DTPEAIVLSG FDPVRREIAR LALHQLVQDG RIHPARIEEV VSKVRKQVEE EIIETGKRTV
IDLGIHGLHP ELIRLIGKMK YRSSYGQNLL QHSRETANLC AIMASELGLN PKKAKRAGLL
HDIGKVPDDE PELPHALLGM KLCEKFKEKP DICNAVGAHH DEVEMMSLIA PIVQVCDAIS
GARPGARREI VEAYIKRLND LEQLAMSYPG VIKTYAIQAG RELRVIVGAD KTDDASVETL
SNEIAKRIQD EMTYPGQVKI TVIRESRSVS YAK
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