Gene PG0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG0398 
SymbolrecF 
ID2551893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand
Start bp434706 
End bp435800 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content48% 
IMG OID637149174 
ProductrecF protein 
Protein accessionNP_904704 
Protein GI34540225 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATAG AAGAACTCCA TATCGTCAAT TTTAAGAGTA TCGCAGCTGC CGATTGCCGG 
TTTTCGCCCA AAGTGAACTG TCTGGTGGGG AACAATGGAA TGGGCAAGAC TAATCTGCTG
GATGCGCTGC ATTTCCTCTC TTTCTGTCGC AGTCATCTTT CCGTACCGGA CAATATGGTT
GTCAGACATG GAGAAGAAAT GGCCCTGTTG CAGGGGCTTT ATCGGGATGA AAGCGGCGAT
GGGATAGAGC TGCTCCTTTC TATTCGTCCG GGGAAGCACA AGGTACTGCG TCGGAATAAG
AAAGAATATG AACGACTGAG CGATCATATC GGTCGCTTCC CGCTGGTAAT AGTTTCTCCG
CAGGACTATC AGCTCATACT GGGCGGTAGC GATGAGCGCA GACGATTCAT GGATCAGCAG
CTTTGCCAGC AGGATCCTCG GTATCTGTCG GCTCTCATTC AGTACAATCG GCATTTGCAA
CAGCGCAATA CAATGCTCAA GCAGGACCGT CACGATGATG CTCTGATGGA CGTTTTGGAG
TTACAGATGG GATCCTATGC AGCAGAGATC TGCAACAAGC GTAGCCGTTT TATCGAGGAT
TTTCTTCCTG TTTTCAATGA TCTTTATTCC GACATTAGCG GATCTGCAGA GAAAGTCAGC
CTATCCTATC GCTCGCACTT GGCGGACGGA ATACCTCTTG AAGAATTGCT TCGCAGGAGC
CGCCCCAAGG ACTATTTGCT GGGATTTTCT TCTTGCGGTG TACACAAGGA CGAATTGGAA
ATGCTTCTTG GTGGAGTTCT TATTCGGAAA ATAGGTTCGG AGGGACAAAA CAAGACTTTC
CTGATCAGCA TGAAGTTGGC ACAGTTCCGC CATCAGCAAC TGCACGGTGA TGAGACGCCC
ATTTTGCTGC TCGATGATAT ATTCGACAAA CTGGATGCCA CCCGTGTGGA GCGGATTATC
CGCCTTGTCG GCGGTAACGG TTTCGGGCAG ATCTTCATCA CAGATACGAA TCGGAAAAAC
TTGGACGAGA TTATCGCTTC TTGGAGTGAG GATTACCGCC TTTTCAAAAT AGAAAACGGA
CAGATATTCC AATAA
 
Protein sequence
MIIEELHIVN FKSIAAADCR FSPKVNCLVG NNGMGKTNLL DALHFLSFCR SHLSVPDNMV 
VRHGEEMALL QGLYRDESGD GIELLLSIRP GKHKVLRRNK KEYERLSDHI GRFPLVIVSP
QDYQLILGGS DERRRFMDQQ LCQQDPRYLS ALIQYNRHLQ QRNTMLKQDR HDDALMDVLE
LQMGSYAAEI CNKRSRFIED FLPVFNDLYS DISGSAEKVS LSYRSHLADG IPLEELLRRS
RPKDYLLGFS SCGVHKDELE MLLGGVLIRK IGSEGQNKTF LISMKLAQFR HQQLHGDETP
ILLLDDIFDK LDATRVERII RLVGGNGFGQ IFITDTNRKN LDEIIASWSE DYRLFKIENG
QIFQ