Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0398 |
Symbol | recF |
ID | 2551893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 434706 |
End bp | 435800 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637149174 |
Product | recF protein |
Protein accession | NP_904704 |
Protein GI | 34540225 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATAG AAGAACTCCA TATCGTCAAT TTTAAGAGTA TCGCAGCTGC CGATTGCCGG TTTTCGCCCA AAGTGAACTG TCTGGTGGGG AACAATGGAA TGGGCAAGAC TAATCTGCTG GATGCGCTGC ATTTCCTCTC TTTCTGTCGC AGTCATCTTT CCGTACCGGA CAATATGGTT GTCAGACATG GAGAAGAAAT GGCCCTGTTG CAGGGGCTTT ATCGGGATGA AAGCGGCGAT GGGATAGAGC TGCTCCTTTC TATTCGTCCG GGGAAGCACA AGGTACTGCG TCGGAATAAG AAAGAATATG AACGACTGAG CGATCATATC GGTCGCTTCC CGCTGGTAAT AGTTTCTCCG CAGGACTATC AGCTCATACT GGGCGGTAGC GATGAGCGCA GACGATTCAT GGATCAGCAG CTTTGCCAGC AGGATCCTCG GTATCTGTCG GCTCTCATTC AGTACAATCG GCATTTGCAA CAGCGCAATA CAATGCTCAA GCAGGACCGT CACGATGATG CTCTGATGGA CGTTTTGGAG TTACAGATGG GATCCTATGC AGCAGAGATC TGCAACAAGC GTAGCCGTTT TATCGAGGAT TTTCTTCCTG TTTTCAATGA TCTTTATTCC GACATTAGCG GATCTGCAGA GAAAGTCAGC CTATCCTATC GCTCGCACTT GGCGGACGGA ATACCTCTTG AAGAATTGCT TCGCAGGAGC CGCCCCAAGG ACTATTTGCT GGGATTTTCT TCTTGCGGTG TACACAAGGA CGAATTGGAA ATGCTTCTTG GTGGAGTTCT TATTCGGAAA ATAGGTTCGG AGGGACAAAA CAAGACTTTC CTGATCAGCA TGAAGTTGGC ACAGTTCCGC CATCAGCAAC TGCACGGTGA TGAGACGCCC ATTTTGCTGC TCGATGATAT ATTCGACAAA CTGGATGCCA CCCGTGTGGA GCGGATTATC CGCCTTGTCG GCGGTAACGG TTTCGGGCAG ATCTTCATCA CAGATACGAA TCGGAAAAAC TTGGACGAGA TTATCGCTTC TTGGAGTGAG GATTACCGCC TTTTCAAAAT AGAAAACGGA CAGATATTCC AATAA
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Protein sequence | MIIEELHIVN FKSIAAADCR FSPKVNCLVG NNGMGKTNLL DALHFLSFCR SHLSVPDNMV VRHGEEMALL QGLYRDESGD GIELLLSIRP GKHKVLRRNK KEYERLSDHI GRFPLVIVSP QDYQLILGGS DERRRFMDQQ LCQQDPRYLS ALIQYNRHLQ QRNTMLKQDR HDDALMDVLE LQMGSYAAEI CNKRSRFIED FLPVFNDLYS DISGSAEKVS LSYRSHLADG IPLEELLRRS RPKDYLLGFS SCGVHKDELE MLLGGVLIRK IGSEGQNKTF LISMKLAQFR HQQLHGDETP ILLLDDIFDK LDATRVERII RLVGGNGFGQ IFITDTNRKN LDEIIASWSE DYRLFKIENG QIFQ
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