Gene PG0386 details

Gene Information

• Locus tag: PG0386
• ID: 2551578
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 419187
• End bp: 420389
• Gene Length: 1203 bp
• Protein Length: 400 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637149160
• Product: phage integrase family site specific recombinase
• Protein accession: NP_904693
• Protein GI: 34540214
• COG category: [J] Translation, ribosomal structure and biogenesis; [L] Replication, recombination and repair
• COG ID: [COG1544] Ribosome-associated protein Y (PSrp-1); [COG4974] Site-specific recombinase XerD
• TIGRFAM ID: [TIGR00741] ribosomal subunit interface protein; [TIGR02224] tyrosine recombinase XerC

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATGAAA CACCCGACAC CATCGAAAGA TTCCTCTATT ATCTACGCTA CGAAGTTCAC 
GCGTCAGAAC GAACCGTTTG TGACTATGCA CAAGATTTGA ATCGCTATGC CGCTTTCTTC 
AGTGAACACA CGGGAGAAGT ATTCGAGCCA AGCGAACGCG ACAAGGATGT CGCGCGCGCT 
TGGCTCTTCT CTTTAATGGA AGCCGGACAA AAAAGCTCTT CCGTTCAGCG CAGACTGAGC 
GCGTTGAAAA GCTTTTACAA ATACATGGTC AAAATCGGGC TTATTGGGCA AAGTCCTGTC 
CGAATGCTGA GGGGACCGAA GAAAGAGAGG CCGCTACCTG TTTTCGTCCC GAACAATGAA 
ATGGAAAAAG TGCTGAATAA GCCCATCCGT GAAGATGATT TCGAGGCCGT ACGGGACAGA 
CTGATTCTGG AGACACTGTA TGAAGTGGGT TTGCGGCGTT CCGAAATAGC CACTCTCAAA 
GACAGCGCGG TAGAAGACAA GGCCGGCTGC ATACGTATCA TCGGCAAAAG GAATAAAGAG 
CGAATAGTAC CTTTCGGAAA ACGTCTGCAA GATATGATAG ACAACTATCG GAATATTCGT 
GAAGAAAAAG TAGGGAAATC TGATTTTTTT TTCGTTTCTT TGGATGGCAG ACCACTGACA 
GGTGAAGTGG TCTACAAGAT AGTTCGTACG GCATTGGCAA ACGTACCGCA CCTGACCAAG 
AGGAGTCCGC ATGTTCTGAG ACACAGCTTC GCCACCGAAA TGCTCAACCA CGGAGCAGAT 
CTGATATCGG TCAAAGAACT TTTAGGGCAC GACAGCCTTT CTACGACGGT GCAATACACG 
CATATTTCGT TCGAACAACT TAGACAGATG TATAACGCTC ATCCAAGGGC AAAAAAAGAA 
ACGACCATGA CAGATGTAAG AATCCAAGCT CTGCATTTCG ATGCTACCGA CCAACTGAAA 
GATTTTGTAC AGAAGAAAAT ATCCAAGCTG AATCGCTTGT CCGATGGAAT AACGGGAGCC 
GAAGTCGTCC TCAAGCTCGT CAAGCCTGAG ACCGTACAAA ACAAAGAAGC ATCTATCAGG 
CTCTATATCC CCGGCGACGA CTTGTTCGCG GAAAAGATAG CAGACACCTT TGAGGAAGCT 
ATTGATCTGA CAGTCGATGC ACTGAAAAGA CAGATCGAAA AAAGGAAAGA ACAGAGAAAA 
TAG 

 

Protein sequence

MNETPDTIER FLYYLRYEVH ASERTVCDYA QDLNRYAAFF SEHTGEVFEP SERDKDVARA 
WLFSLMEAGQ KSSSVQRRLS ALKSFYKYMV KIGLIGQSPV RMLRGPKKER PLPVFVPNNE 
MEKVLNKPIR EDDFEAVRDR LILETLYEVG LRRSEIATLK DSAVEDKAGC IRIIGKRNKE 
RIVPFGKRLQ DMIDNYRNIR EEKVGKSDFF FVSLDGRPLT GEVVYKIVRT ALANVPHLTK 
RSPHVLRHSF ATEMLNHGAD LISVKELLGH DSLSTTVQYT HISFEQLRQM YNAHPRAKKE 
TTMTDVRIQA LHFDATDQLK DFVQKKISKL NRLSDGITGA EVVLKLVKPE TVQNKEASIR 
LYIPGDDLFA EKIADTFEEA IDLTVDALKR QIEKRKEQRK