Gene PG0380 details

Gene Information

• Locus tag: PG0380
• Symbol: uvrB
• ID: 2551907
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 409242
• End bp: 411278
• Gene Length: 2037 bp
• Protein Length: 678 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637149154
• Product: excinuclease ABC subunit B
• Protein accession: NP_904687
• Protein GI: 34540208
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0556] Helicase subunit of the DNA excision repair complex
• TIGRFAM ID: [TIGR00631] excinuclease ABC, B subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACTACA AACTCACTTC TCGATTCAAG CCCACGGGCG ACCAGCCGGA AGCCATTCGC 
CAACTCGTAC AGGGCATCAA CGAAGGGATG CCGGCTCAGA CGCTGCTCGG CGTAACGGGT 
TCGGGCAAAA CTTTTACGGT GGCTAACGTG GTGGCGGCGG TCAATCGTCC GACCCTTGTC 
CTGAGTCACA ACAAGACCTT GGCAGCACAG CTATACGGAG AGTTCAAAGC CTTCTTCCCC 
GAGAATGCGG TGGAGTATTT CGTCAGCTAC TACGACTACT ATCAGCCCGA GGCCTACCTC 
CCCGTCACAG ACACCTATAT CGAAAAGGAC ATGGCCATCA ACGCGGAGAT CGAAAAACTG 
CGATTGAGGG CCACGGCTTC GCTCCTGTCA GGGCGGAAAG ATGTGCTTGT GGTCAGCTCC 
GTATCCTGTC TCTACGGTAT GGCCAATCCT GAAGCTTTTT CCGAAAAGGT GATCAGCCTG 
CACACGGGAC AAAGGGCAGA CAGGGATCAT TTTATCCGCC TGCTGGTAGA GAGCTACTAC 
ACGAACAATA AAGTAGAGTT CGAGAGCGGC AACTTCCGTG TCAAAGGCGA CAGCGTGGAC 
ATATTCCCCG CCGTAGAAGG TTATGACGGC GTGGCATACA GGGTGGAGTT TTGGGATGGA 
GAGGTCGAGC GGCTGAGTAC CTTCGATCCG CGAACGGGAC GGGAATACGG CCTGCTGTCG 
GAGCTGAAGA TATATCCGGC CAATCTCTTC GTGACGACTA AGGAGCAGGT GGATCGGGCA 
GTAGGGAAAA TCGATGTGGA TCTGGGCGCA CAGGTCGATT TTCTGAAAGA AATCGGCAAA 
CCATATGAAG CCAAACGCTT GTATGAGCGG GTCACGTATG ACTTGGAAAT GATCCGTGAG 
TTGGGTTATT GTTCCGGTAT AGAGAACTAT TCGCGCTACT TCGACGGCCG TGACGCGGGC 
GAACGTCCTT TCTGTCTGTT GGATTATTTC CCGGAGGATT TCCTGTTGGT CATAGACGAA 
AGCCATGTAA CGATACCGCA GATACGTGCC ATGTACGGAG GCGATCGTTC GCGCAAGGAG 
AATCTGGTCG AATACGGATT CCGCCTGCCT GCCGCTCTCG ACAATCGGCC GCTTCGCTTC 
GACGAGTTCG AAGCTCTCAC CCCCCGGACC CTTTATATCA GTGCCACGCC TGCCGACTAT 
GAGCTGAACA GAAGCGAAGG CGTGATCGTC GAGCAGCTGA TCCGTCCGAC CGGACTGCTG 
GATCCCATCA TCGACGTCAA GCCGACGGCA AACCAAGTGG ACGATCTGAT GGAGGAGATA 
GCACGCTGCA TCGAAAAGAA AGAGCGCGTA CTGGTAACGA CCCTGACCAA ACGTATGGCA 
GAGGAGCTTA GCGAATACCT GCTACGCCAC GGTATCAGCA CCGGCTACAT ACACAGCGAT 
GTGGACACGC TGGAGCGTGT GCGTATCATG GAAGACCTGC GCAAGGGGGT CTACGATGCA 
CTCATCGGGG TGAATCTGCT CCGCGAAGGA TTGGACTTGC CGGAAGTTTC GCTTGTGGCT 
ATTCTGGATG CGGATAAGGA AGGATTCCTG CGCTCGCATC GTTCGCTCAC GCAGACTGCA 
GGACGTGCCG CCCGGCACAT TCATGGGCGT GTCATCTTCT ACGCGGACAA GATCACCGAC 
AGTATGCAGC TCACCATGGA CGAGACTGCA CGCCGACGCG CAAAGCAACT GGCCTACAAC 
GAAGCGCACG GCATCACCCC CCAACAGATA GTGAAGAACA GTGCTGCCAT TTGGGGAGAA 
GGCGATGTGT CGGCCTTGCA ATCCGATACA GAATCCGGTG CGTACATAGA AGAGAGCAGC 
ATGGTGGCTG CCGATCCTTT GGCCGACTAT CTGAGCAAAC CCAAGCTGGA AGCACTCATT 
GCTTCGACCA AGAAGCAAAT GCTGGCAGCA GCCAAAGAGC TGGACTTTCT GGAAGCGGCA 
CGACTTCGGG ACGAAGCCGC ACGATTGGAA AAGAAACTGG AGCAACTCAC AGCCTAA 

 

Protein sequence

MDYKLTSRFK PTGDQPEAIR QLVQGINEGM PAQTLLGVTG SGKTFTVANV VAAVNRPTLV 
LSHNKTLAAQ LYGEFKAFFP ENAVEYFVSY YDYYQPEAYL PVTDTYIEKD MAINAEIEKL 
RLRATASLLS GRKDVLVVSS VSCLYGMANP EAFSEKVISL HTGQRADRDH FIRLLVESYY 
TNNKVEFESG NFRVKGDSVD IFPAVEGYDG VAYRVEFWDG EVERLSTFDP RTGREYGLLS 
ELKIYPANLF VTTKEQVDRA VGKIDVDLGA QVDFLKEIGK PYEAKRLYER VTYDLEMIRE 
LGYCSGIENY SRYFDGRDAG ERPFCLLDYF PEDFLLVIDE SHVTIPQIRA MYGGDRSRKE 
NLVEYGFRLP AALDNRPLRF DEFEALTPRT LYISATPADY ELNRSEGVIV EQLIRPTGLL 
DPIIDVKPTA NQVDDLMEEI ARCIEKKERV LVTTLTKRMA EELSEYLLRH GISTGYIHSD 
VDTLERVRIM EDLRKGVYDA LIGVNLLREG LDLPEVSLVA ILDADKEGFL RSHRSLTQTA 
GRAARHIHGR VIFYADKITD SMQLTMDETA RRRAKQLAYN EAHGITPQQI VKNSAAIWGE 
GDVSALQSDT ESGAYIEESS MVAADPLADY LSKPKLEALI ASTKKQMLAA AKELDFLEAA 
RLRDEAARLE KKLEQLTA