Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0352 |
Symbol | |
ID | 2551624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 387327 |
End bp | 388907 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637149131 |
Product | sialidase, putative |
Protein accession | NP_904664 |
Protein GI | 34540185 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4409] Neuraminidase (sialidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0283127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATA ATACTCTTTT GGCGAAGACT CGACGTTATG TCTGCCTTGT CGGTTTCTGT TGGCTCATGG CGATGATGCA CCTCTCTGGG CAGGAAGTCA CTATGTGGGG GGACAGCCAT GGAGTGGCGC CGAACCAAGT GCGCCGAACG CTGGTGAAGG TAGCCTTAAG TGAATCCCTT CCTCCGGGTG CAAAACAGAT TCGTATCGGA TTCTCTCTTC CGAAAGAAAC GGAGGAAAAA GTCACCGCCC TATATCTCCT TGTGAGTGAT TCTTTAGCGG TGCGCGACTT GCCGGACTAC AAAGGGCGAG TCTCTTACGA TAGCTTCCCG ATCTCAAAGG AAGATCGTAC CACAGCCCTT TCTGCGGATT CGGTAGCCGG ACGCCGCTTC TTTTATTTGG CTGCGGATAT AGGGCCTGTT GCTTCTTTTT CCCGATCCGA TACGCTGACT GCCCGTGTGG AAGAGGTGGC TGTCGATGGC CGCCCTTTGC CGTTGAAAGA GCTGTCGCCT GCCTCCCGTC GTCTGTATAG GGGGTATGAG GCCCTCTTTG TACCCGGTGA TGGCGGATCG CGGAACTATC GTATCCCGGC CATTTTGAAA ACGGCTAATG GAACACTCAT AGCGATGGCC GACAGACGAA AATATAATCA GACGGATCTG CCGGAGGATA TAGATATAGT CATGCGGCGC AGTACGGACG GAGGGAAATC GTGGAGCGAT CCCAGGATTA TCGTACAGGG AGAGGGGCGC AATCATGGCT TTGGCGATGT AGCCCTGGTG CAAACCCAAG CAGGAAAGCT CCTGATGATC TTTGTCGGTG GAGTAGGCCT GTGGCAGTCT ACCCCCGATC GTCCTCAGCG CACTTATATA TCGGAAAGTC GGGACGAAGG ACTGACTTGG TCGCCTCCTC GGGATATAAC CCATTTCATC TTCGGCAAGG ATTGTGCCGA TCCGGGACGC AGTCGCTGGT TGGCCTCCTT TTGTGCTTCG GGACAAGGGC TTGTGCTGCC ATCCGGTCGT ATCACGTTTG TGGCTGCCAT CCGCGAATCA GGGCAGGAGT ACGTCCTGAA CAACTATGTC CTCTATAGCG ACGATGAGGG CGATACATGG CAGCTTTCCG ACTGTGCATA CCGCCGTGGC GATGAGGCAA AGCTTTCATT GATGCCCGAT GGCAGGGTAC TGATGAGCAT ACGCAATCAG GGACGGCAGG AGAGCCGACA GCGTTTCTTC GCTCTCTCCT CCGACGATGG CCTTACTTGG GAGAGAGCCA AGCAGTTCGA GGGCATCCAT GACCCCGGCT GTAATGGAGC TATGCTTCAA GTGAAAAGGA ACGGAAGGGA TCAAGTGCTG CACTCCCTGC CTCTCGGCCC GGATGGGCGT CGCGATGGAG CTGTCTATCT CTTCGATCAT GTCTCCGGCC GCTGGTCCGC TCCCGTTGTT GTCAATTCAG GATCGAGTGC CTACTCGGAT ATGACTCTGC TGGCGGATGG AACGATCGGT TATTTCGTCG AAGAGGGCGA TGAGATCTCA TTGGTTTTCA TTCGGTTCGT CCTTGACGAT CTCTTCGATG TCCGGCAATG A
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Protein sequence | MANNTLLAKT RRYVCLVGFC WLMAMMHLSG QEVTMWGDSH GVAPNQVRRT LVKVALSESL PPGAKQIRIG FSLPKETEEK VTALYLLVSD SLAVRDLPDY KGRVSYDSFP ISKEDRTTAL SADSVAGRRF FYLAADIGPV ASFSRSDTLT ARVEEVAVDG RPLPLKELSP ASRRLYRGYE ALFVPGDGGS RNYRIPAILK TANGTLIAMA DRRKYNQTDL PEDIDIVMRR STDGGKSWSD PRIIVQGEGR NHGFGDVALV QTQAGKLLMI FVGGVGLWQS TPDRPQRTYI SESRDEGLTW SPPRDITHFI FGKDCADPGR SRWLASFCAS GQGLVLPSGR ITFVAAIRES GQEYVLNNYV LYSDDEGDTW QLSDCAYRRG DEAKLSLMPD GRVLMSIRNQ GRQESRQRFF ALSSDDGLTW ERAKQFEGIH DPGCNGAMLQ VKRNGRDQVL HSLPLGPDGR RDGAVYLFDH VSGRWSAPVV VNSGSSAYSD MTLLADGTIG YFVEEGDEIS LVFIRFVLDD LFDVRQ
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