Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0293 |
Symbol | |
ID | 2551938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 328183 |
End bp | 328761 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637149079 |
Product | secretion activator protein, putative |
Protein accession | NP_904612 |
Protein GI | 34540133 |
COG category | [R] General function prediction only |
COG ID | [COG3926] Putative secretion activating protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.308779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAATG TTAAGTTATT ACTCCCATAT ATATTGAAAT GGGAAGGTGG TTTTGTCCAT GATCCTGCCG ATGCAGGAGG GGCAACAAAC AAAGGTGTAA CAATAGCGAC TTGGAAAAGA GTCGGCTATG ACAAAGACGG CGATGGAGAC ATCGATGTTG AGGATCTCAA GTTGCTAACC GATGATGACG TCCTGAATCG AGTCTTGAAA CCATTTTATT GGGATCGTTG GAAAGCTGAC TTAATCGAGT CTCAAAAGGT GGCTAATATC CTTGTCGATT GGGTTTGGGG TTCAGGCAAG TATGGTATTG TTATTCCTCA AAGGATACTA GGTGTGCAGG CTGATGGAAT AGTGGGCAAT AAGACCTTAC AGGCTGTCAA TAGTGCAGAT CCCGATGAGC TGTTTGAGTC CATCTTCGAT GCACGTCGCG AGTTCTTAGA GGACATTACA GCAAGAAGCA TAAAAAAGTA CGAGGATAGC ATCGGACGCA AGGCCACCGA ACGCGAATTG CTAAGGCATA CCAACAAACG TTTCTTGAGA GGTTGGCTGA ACCGTCTTGA AGATATTAGG AAGCTCTAA
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Protein sequence | MANVKLLLPY ILKWEGGFVH DPADAGGATN KGVTIATWKR VGYDKDGDGD IDVEDLKLLT DDDVLNRVLK PFYWDRWKAD LIESQKVANI LVDWVWGSGK YGIVIPQRIL GVQADGIVGN KTLQAVNSAD PDELFESIFD ARREFLEDIT ARSIKKYEDS IGRKATEREL LRHTNKRFLR GWLNRLEDIR KL
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