| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PG0172 |
|---|
| Symbol | |
|---|
| ID | 2553133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Porphyromonas gingivalis W83 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002950 |
|---|
| Strand | + |
|---|
| Start bp | 193633 |
|---|
| End bp | 194415 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637148978 |
|---|
| Product | exonuclease |
|---|
| Protein accession | NP_904511 |
|---|
| Protein GI | 34540032 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGT GGATGGCTGT GGCCCTGCTT GTGCTGATTG CAGGCATGGC TTTTATGACG
TTATGGAAAC CGAAAGATCC ATGGCAGGCC GACAACCTGC CGCCAGAAGG CTCTTCGGAT
CAATTCCGTC GCAAGGGGAT TATCGATGCC GATGCCTCGT CTTTGTTGGT GCCTGTGCCT
GCCGCTGTGG ATAGCCTGCC TTGTTTTCTC GTTATCGATA CGGAGACGAC CGGATTGCCT
GCCGATGAAA CGCAGTTTAT TTCCGGAGTA GATGCACCGG CACCCGTATC GGTTGGTTGG
CAGCTGCTGG ACTTTCGTTT CAGATGTATA GAGGAAGTCG TTTGCCGGCT GTCTACCGAC
GAACCGGTAT CACCCGAGGC TGCAGCTTTG CACGGCATCA CGGATGCTTC GCTACACGGC
GATGATCCGC ATGAGGTTTA CGCACGTTTG CTTGGGGCTG TATCGAAAGC AAAAGTACTG
TCTGCCCACA ATCTGGCCTT TCACCGTTCC GTTCTGGTCT ATGATATGAG ACGGAGGGGA
TTCGATCCGT CTCCCTTGTT CTCCCTTGAT GATTATTGTA CAATGGAGGC GGGAGTCGAT
TTTACTCATC TGTACGGAAG CTGTGGAACA TGGAAGCTGC CACGTCTGAC CGAGCTGTTC
GGTGTCCTCT ATTTCGGATT GCCGGGCGTT AGAACGACCT ACCGCGAGAA GGTGCGGAAC
GATATACGTC TCGTGGCAGC ATGTTTGCAT CGGATGAATC CGACCACACC GTCTTTAGAG
TGA
|
|---|
| Protein sequence | MTLWMAVALL VLIAGMAFMT LWKPKDPWQA DNLPPEGSSD QFRRKGIIDA DASSLLVPVP
AAVDSLPCFL VIDTETTGLP ADETQFISGV DAPAPVSVGW QLLDFRFRCI EEVVCRLSTD
EPVSPEAAAL HGITDASLHG DDPHEVYARL LGAVSKAKVL SAHNLAFHRS VLVYDMRRRG
FDPSPLFSLD DYCTMEAGVD FTHLYGSCGT WKLPRLTELF GVLYFGLPGV RTTYREKVRN
DIRLVAACLH RMNPTTPSLE
|
|---|
| |