Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0159 |
Symbol | pepO |
ID | 2552327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | - |
Start bp | 181185 |
End bp | 183254 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637148967 |
Product | endopeptidase PepO |
Protein accession | NP_904500 |
Protein GI | 34540021 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3590] Predicted metalloendopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA CAATCAAGTT TCTTTGCCTT GCGCCGGCAG TAATCGGCGC ATTGATGCTG ACCGGCTGCA ATGGCAATAA GGGTCAGACT AACGATACTG ACAGGAAGCG CGAACCGGTA CCGGCCATCG ACCTCAGTGC CATGGATACA TCCGTACGCC CGCAGGACGA CTTTTATCGC TACTGCAACG GCAATTGGAT GAAAAACAAT CCTCTCAAAC CTGCTTATAG TCGCTACGGC TCATTCGACA TCCTGCACGA CAGCACCCTC GAGCGTGTAC ACCTGATTGT GGACAACCTT GCAGCAGGAC AGCATGAAGT CGGCACTAAT GAGTATCGTA TAGCTACGCT CTATCGTCAA GCTATGGATA GCATCAAACG GAATAAAGAC GGAGCAGCCC CTCTGAAGGA AGATCTTCAG AAGATCGAAG CCATTGCGGA CAGAGCTGCT ATGGTGAAGT ATGCCGCTGC TAAGGACAAT ATGGGTGGAA GCACATTCTT CGGATCGTAC GTTTATGCCG ACGCCAAGAA TAGCGAGATG AACATCTTCC ATATCACCCA GACCGGCTTG GCTCTTGACA ATCGAGACTA CTATCTCAAG CAGGATGCCA AGTCTCAGCA AATACGCGAG GCGTATGTAG CTTATCTGAA CAAAATTGCT AAGCTGGCCG GCTACGACGA TGAAGCAGCT ACCCGTATTG CCAAGAACGC CATGAAGATG GAAACCGAAC TGGCACAAAT CTGCTACAGC AAAGAAGAAC TACGCGATAC CCATCGTAAC TACAATAAGA TGGCAGTGAA GGAGTTTACG AATAAGTACC AAGGCTTTGA TTGGACTACT TACCTCGCCG ATCGTCAGCT CACCACCCTC GAAGAGTGGG ATGTGGAGCA ACTCGATTTC TTCAAGAAGT TCGACTCTTG GTTTGCCAAA GCCGATCTGA ACGAAATGAG GGACTATCTC CTCGCCGGCA CGATCAGCGG TGCAGCAAGC TATCTGAGCG ATGACTTCGA GCAAGCTCGT TTCGACTTTT TCGGTAAGAC GCTGAGTGGA ACCACCGAAA TGCATCCTCG CTGGAAACGT TCCGTAGGTA TGGTAAGCAG CTTTCTGGGC GAAGCACTGG GCGAAGTTTA TGTAAAGCAA TACTTCCCAC CCGAAGCAAA AGAGCGCATG CTCAAACTCG TCAAGAACCT GCAAACGGCC CTCGGAGAGC GTATCAACAT GCTTACATGG ATGGGCGACT CCACGAAGAT GAAAGCTCAG GAAAAACTCA ATTCCTTCAT CATCAAGATC GGTTATCCCG ACAAGTGGAA AGACTATTCC AAGATGGAAA TCAAGGGAGA CAGCTATTAT GCCGATATCA AACGCGCCAG CAAATGGATG CATGACGACA ATATGGCTGA CCTCGGCAAG ACTGTAGATC GCGAGCGTTG GCTGATGAAT CCTCAGGATG TCAATGCCTA CTACAATCCG ACCACAAACG AAATTTGTTT TCCTGCAGCC ATCCTCCAAC CGCCTTTCTT CAACATGGAT GCAGACGATG CTGTCAATTA TGGCGGTATC GGCGTAGTGA TCGGACACGA GATGACGCAT GGATTCGACG ATCAAGGCCG CAACTTCGAC AAAGACGGCA ATATGATCAA CTGGTGGACT GCTGAAGATG CTCAGAAGTT CGAGACCACA GCCCGAAAAC TGGCCGATCA GTTCAGCGAG ATCTACGTAG CCGATGGTGT TCGTGCCAAT GGTAATATGA CACTTGGCGA GAACATCGCA GATCAGGGCG GTCTCCTCAT CTCTTATCTG GCTTTCCGCA ATGCTGCCAA GGGTGAGGTA ATGGAAGAAA TCGACGGATT CACTCCCGAC CAGCGTTTCT TTATCGGTTA TGCCCGTCTA TGGGGACAAA ATATTCGTCC GGAAGAGGTT CTCCGTCTCA CACAGATCGA TGTGCACAGT TTGGGTGAGC TGCGCGTCAA TCAAGCACTG CGCAATATCG AAGCTTTCTA CGAAGCTTTC AATATACAGC CTACTGATAA GATGTATTTG GAACCCGAAA AGCGTGTAGT CGTTTGGTAA
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Protein sequence | MNKTIKFLCL APAVIGALML TGCNGNKGQT NDTDRKREPV PAIDLSAMDT SVRPQDDFYR YCNGNWMKNN PLKPAYSRYG SFDILHDSTL ERVHLIVDNL AAGQHEVGTN EYRIATLYRQ AMDSIKRNKD GAAPLKEDLQ KIEAIADRAA MVKYAAAKDN MGGSTFFGSY VYADAKNSEM NIFHITQTGL ALDNRDYYLK QDAKSQQIRE AYVAYLNKIA KLAGYDDEAA TRIAKNAMKM ETELAQICYS KEELRDTHRN YNKMAVKEFT NKYQGFDWTT YLADRQLTTL EEWDVEQLDF FKKFDSWFAK ADLNEMRDYL LAGTISGAAS YLSDDFEQAR FDFFGKTLSG TTEMHPRWKR SVGMVSSFLG EALGEVYVKQ YFPPEAKERM LKLVKNLQTA LGERINMLTW MGDSTKMKAQ EKLNSFIIKI GYPDKWKDYS KMEIKGDSYY ADIKRASKWM HDDNMADLGK TVDRERWLMN PQDVNAYYNP TTNEICFPAA ILQPPFFNMD ADDAVNYGGI GVVIGHEMTH GFDDQGRNFD KDGNMINWWT AEDAQKFETT ARKLADQFSE IYVADGVRAN GNMTLGENIA DQGGLLISYL AFRNAAKGEV MEEIDGFTPD QRFFIGYARL WGQNIRPEEV LRLTQIDVHS LGELRVNQAL RNIEAFYEAF NIQPTDKMYL EPEKRVVVW
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