Gene PG0152 details

Gene Information

• Locus tag: PG0152
• Symbol: nspC
• ID: 2552247
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 174611
• End bp: 175747
• Gene Length: 1137 bp
• Protein Length: 378 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637148961
• Product: carboxynorspermidine decarboxylase
• Protein accession: NP_904494
• Protein GI: 34540015
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0019] Diaminopimelate decarboxylase
• TIGRFAM ID: [TIGR01047] carboxynorspermidine decarboxylase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 30
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAAAAT ACCACGACAT AGCATCTCCG GCCTACATAC TGGAAGAAGA TCTGCTAAGG 
CGCAATCTAT CCCTGATTGC GTCCGTAGCC GACCGTACCG GCGTGGAGAT CATCCTCGCT 
TTCAAGGCCT ATGCCCTCTG GCGTACCTTC CCGATCATCA GGGAATACGT ACCCCACAGT 
ACGGCCAGCT CTGTATGGGA AGCCCGCCTT GCCTTCGAAG AGATGGGGGC ACCGGCTCAT 
ACATTCAGTC CGGCTTATAC GCCGGAGGAG TTTCCGGAGA TACTGCGTTA TAGCAGTCAC 
GTCACATTCA ACTCTCTCAG CCAGTACTAC CTGCTTTCGC CCATGGTGAA GAACGTAGGC 
GTATCGCTCG GACTCAGAAT CAACCCCGAA TACTCGGCCG TGGAGACCGC GCTCTACAAT 
CCTTGTGCAC CGGGTTCGCG ATTCGGTGTA TCGGCTTCCG AATTGGGCGA CACCCTGCCG 
GAGGGTATCG AGGGTCTGCA CTTCCATACG CTTTGCGAGA GCACCGGCTA CGAACTGGAG 
AAGACCCTCA AGATCATTGA GGATCGCTTC GCTTCCGTGC TGGAGCAAGC GCATTGGCTC 
AATATGGGCG GCGGCCACCT GATGACCCGT CGGGACTATG ACGTGGAGCA CCTTGTGCAG 
GTGCTGAACG ACTTCTCCCG CCGCCATCCC CATCTGCATC TTATCATGGA GCCGGGCAGT 
GCTTTCGGCT GGCAGACGGG GTTTCTCAAG AGCACGGTGG TGGACATCGT AGAGCATCAA 
GGCATTGCCA CTGCTATCGT GGATGTGTCC TTCACCTGCC ACATGCCGGA CTGTCTGGAG 
ATGCCTTACA AACCCGTCAT TCGTGGAGCG CATCAGGAGC CGGTACCCGG CCTGCCCACA 
TACAGGATAG GCGGATGCAG CTGTCTGAGC GGCGACTTCA TCGGTGACTG GAGTTTCGAT 
CGGCCGTTGC AGGTGGGCGA TGAACTGATA TTCGAGGACA TGCTCCACTA CACGACGGTG 
AAGACGACCA TGTTCAACGG TGCACGCCAT CCGGACATCG TACTGCTGCG CACCGACGGG 
AAGAAAGAGG TGTTGCGCCG GTTCGATTAT GAGGATTACA AGAACAGAAT GAACTAA 

 

Protein sequence

MAKYHDIASP AYILEEDLLR RNLSLIASVA DRTGVEIILA FKAYALWRTF PIIREYVPHS 
TASSVWEARL AFEEMGAPAH TFSPAYTPEE FPEILRYSSH VTFNSLSQYY LLSPMVKNVG 
VSLGLRINPE YSAVETALYN PCAPGSRFGV SASELGDTLP EGIEGLHFHT LCESTGYELE 
KTLKIIEDRF ASVLEQAHWL NMGGGHLMTR RDYDVEHLVQ VLNDFSRRHP HLHLIMEPGS 
AFGWQTGFLK STVVDIVEHQ GIATAIVDVS FTCHMPDCLE MPYKPVIRGA HQEPVPGLPT 
YRIGGCSCLS GDFIGDWSFD RPLQVGDELI FEDMLHYTTV KTTMFNGARH PDIVLLRTDG 
KKEVLRRFDY EDYKNRMN