Gene PG0084 details

Gene Information

• Locus tag: PG0084
• Symbol: sda
• ID: 2552213
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: +
• Start bp: 97972
• End bp: 99171
• Gene Length: 1200 bp
• Protein Length: 399 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637148895
• Product: L-serine dehydratase, iron-sulfur-dependent, single chain form
• Protein accession: NP_904433
• Protein GI: 34539954
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1760] L-serine deaminase
• TIGRFAM ID: [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.644978
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGAATCGA TAACCCAAAT ATATCGCATC GGCTACGGTC CGAGCAGTAG CCACACGATT 
GGCCCACGTC GGGCTGCTGA GATGTTTCTC GATCGGAACC CCCGGGCGAC CTCTTTCCGT 
GTTACGCTAT ACGGCAGCCT TGCTGCCACG GGCAAAGGAC ACCTCACGGA TGCAGCTATC 
CTTGCCGTCT TGGAAGCAAA GGCTCCGACC GAAATCGTTT GGAAACCGGA GATCTTCCAA 
AATTTTCACC CCAACGGCAT GCTCTTCGAG AGCTTCGACA AAGAGGGCAA GCAGCTCGAC 
GACTGGCTCA TCTATAGCAT CGGCGGCGGA GTCTTGGCCA ACGAACACTT CAACGAACAG 
CGAGGTCGCG AGGTATATCC GCTCAGCAAG ATGGCAGATA TTCTCGACGA ACTGAACAGG 
CGCGGCCTAA GCTATTGGGA GTATGTGGAA GAAAACGAAG ATCCCGATAT ATGGGACTAT 
TTGGCTGAGG TCTGGTCGGT AATGCGGAGC GCCATTCAGG AGGGGCTCGA TGCTGAGGGG 
GTGCTGCCGG GTGGACTGGG CGTTCGCCGG AAGGCAGCCA GCTATCTGAT TCGTGCGCAG 
GGGTATTCGC CGGGTGTACG AAGCCGAGGC AATGTATATG CCTATGCTTT GGCTGTGAGC 
GAACAGAATG CATCGGGTGG CAAGATCGTA ACGGCGCCGA CATGTGGGTC GTGCGGCGTT 
GTACCGGCGG TACTCCACCA CCTCCAACAG ACTCGTGACT TCAGCGATAA GCGCATATTG 
CGTGCACTGG CTACGGCCGG CCTTTTTGCT AATGTGGTAC GCACCAATGC TTCTATTTCG 
GGTGCAGAAG TCGGCTGTCA GGGCGAAGTG GGAGTGGCTT GTGCCATGGG AGCGGCAGCC 
AGCAGCCAGC TATTCGGGGG TACCCTGTCC CAAATCGAAT ATGCTGCAGA GATGGCTTTG 
GAGCATCACC TCGGACTGAC CTGCGACCCT GTATGCGGAT TGGTGCAGGT ACCTTGTATC 
GAACGAAATG CCTTTGCGGC AGCACGAGCT TTGGATGCCA ATACTTATGC CAATTTCAGC 
GATGGCAGAC ACCGCATTTC GTTCGATCAG GTCGTGGAAG TGATGCGTCA GACGGGCAAG 
GATTTGCCGA GTCTATATAA GGAAACCTCT CAGGGTGGAT TGGCCATAGT ACACTGCTGA 

 

Protein sequence

MESITQIYRI GYGPSSSHTI GPRRAAEMFL DRNPRATSFR VTLYGSLAAT GKGHLTDAAI 
LAVLEAKAPT EIVWKPEIFQ NFHPNGMLFE SFDKEGKQLD DWLIYSIGGG VLANEHFNEQ 
RGREVYPLSK MADILDELNR RGLSYWEYVE ENEDPDIWDY LAEVWSVMRS AIQEGLDAEG 
VLPGGLGVRR KAASYLIRAQ GYSPGVRSRG NVYAYALAVS EQNASGGKIV TAPTCGSCGV 
VPAVLHHLQQ TRDFSDKRIL RALATAGLFA NVVRTNASIS GAEVGCQGEV GVACAMGAAA 
SSQLFGGTLS QIEYAAEMAL EHHLGLTCDP VCGLVQVPCI ERNAFAAARA LDANTYANFS 
DGRHRISFDQ VVEVMRQTGK DLPSLYKETS QGGLAIVHC