Gene PG0074 details

Gene Information

• Locus tag: PG0074
• Symbol: prfA
• ID: 2552621
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Porphyromonas gingivalis W83
• Kingdom: Bacteria
• Replicon accession: NC_002950
• Strand: -
• Start bp: 88177
• End bp: 89262
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637148886
• Product: peptide chain release factor 1
• Protein accession: NP_904424
• Protein GI: 34539945
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 27
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCAGAGA ATAACCTATT AGACCGATTG GATGGCTTGG AGAGCCGTTT CGAAGAGATT 
TCCACGCTTA TCACGGATCC GGCCGTAATC GCGGACATGA AGCGTTTCAC GAAGTTGAGC 
AAGGAGTATC GCGATCTGGA AAAGATCCAT ACGGCCGGGC GCGACTATCG CAATCTGCTC 
GCCAACATCG AGGAAGCAAA GCATACCATG GCCAAAGAGA GCGACGAGGA GTTGCGCGAG 
ATGGCTCGCG AGATGCTGGC CGAGGCTAAC GAACGCTTGC CCATTTTGGA GGAGGAGATC 
AAGATGCTAC TCATTCCGGC CAATCCGGAG GATGACAAGA ATGCCATCGT GGAAATTCGC 
GGAGGAACGG GGGGCGATGA GGCTGCACTT TTTGCCGGCG ACCTCTACCG CATGTACGTC 
AAGTATTGCG AGAGCAAAGG CTGGCAGGTG GAGGTCACCG ACCTGAGCGA AGGAGCTACG 
GGTGGTTACA AAGAGATCGT CTTCTCGGTC AAGGGGGAAG GAGTGTATGG TATCCTGAAA 
TATGAGAGCG GTGTGCACCG TGTCCAGCGC GTACCTGCGA CCGAGACACA GGGGCGCATA 
CATACCTCGG CAGCTACCGT GGCTGTCTTG CCCGAAGCCG AAGAAGTGGA CGTGGAGATC 
AATCCGGCAG ACATCGAGAT GCAGACGTCC CGTTCAGGCG GTGCCGGAGG TCAGAATGTA 
AACAAGGTGG AGACTAAGGT GCAGCTTACG CACAAGCCTA CGGGTATGGT GGTGGTTTGC 
CAGCAGGCTC GTTCGCAGAT TGCCAACCGC GAACTGGCTA TGCAAATGCT GCGCTCCAAG 
CTCTACGACA TAGAGCTGTC CAAGCATAAC GAAGCTATTG CAGCCCGACG CAAGACGATG 
GTATCGACCG GCGACCGTTC GGCCAAGATT CGTACCTACA ACTATCCGCA AGGACGGGTG 
ACGGATCACC GCATCAATAT GACGGTCTAC AACCTGTCGG CCGTAATGGA CGGTGAGGTA 
CAGCCTTTTA TCGATGCCTT GATAATAGCA GAAAATGTTG AGCGGATGAA AGAAGCCGCC 
TTATAA 

 

Protein sequence

MSENNLLDRL DGLESRFEEI STLITDPAVI ADMKRFTKLS KEYRDLEKIH TAGRDYRNLL 
ANIEEAKHTM AKESDEELRE MAREMLAEAN ERLPILEEEI KMLLIPANPE DDKNAIVEIR 
GGTGGDEAAL FAGDLYRMYV KYCESKGWQV EVTDLSEGAT GGYKEIVFSV KGEGVYGILK 
YESGVHRVQR VPATETQGRI HTSAATVAVL PEAEEVDVEI NPADIEMQTS RSGGAGGQNV 
NKVETKVQLT HKPTGMVVVC QQARSQIANR ELAMQMLRSK LYDIELSKHN EAIAARRKTM 
VSTGDRSAKI RTYNYPQGRV TDHRINMTVY NLSAVMDGEV QPFIDALIIA ENVERMKEAA 
L