Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PG0056 |
Symbol | |
ID | 2552384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Porphyromonas gingivalis W83 |
Kingdom | Bacteria |
Replicon accession | NC_002950 |
Strand | + |
Start bp | 68142 |
End bp | 69842 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637148869 |
Product | hypothetical protein |
Protein accession | NP_904407 |
Protein GI | 34539928 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATA ATTGTCATTT GACTGAGAAA TCATTTCGAA GTGTTGTCCT CCCGAAGGAT TCCGTCCTGA CTTTATTTTT CCGAATTTGT CTCCGAAACT GGTATTGGAT ACTCCTTTCT ATTGTCCTTT TCGCCGGATG GGGTGTGGTG AAGTATAAGA GGGCCGGCAT GGCTCCCAGC ACCTATTTTA CGACCGTAAT GGCACGATTC CCCGAAGGCG TTCAGAGAGC ATGCTCCGGT GGGTTGAATC CAAACTACAA TGTATATGAT AATTATACGC CTCGTTGGGA AGGTATTTCT GTATTAGATC AGAATTCTAT TTTCAATGGT CTTTGTGCTA CAAGTCTCGT AGAAAGAGTG GGAGAGAAAA TACAGTACGA TGTGAATTAT TATCTCCCGG GCAAAGTGAC CAATCATGAT TTTTACGATC ATACACCCAT TCATTTGATC TTTTCGCCGG AAAGTGCACT TAGTTCTTTC ACTGTAAAGA TGAAGGTGGA AAAAGAGCAT GCTACGATTC TCTCTTTGAA AGGAAAGCAT GATGGAGAGA AAGTAAGCAT AAAGGATATT CGGCTTCCTT ATGGTATTTC TGTGGCTACT CCGATCGGGG AACTTAGGGT GGAGAAAACG CCACGATTCG ACTATGAAAC TTCGAAAAAA GAATTTTTTT CTAAGCCTAT CATAATAGTT ACTAAAGAAT CAAAGGATAA GGCGCGAGTG CTTTACGATT CGGGGCTTAG AACCGAGGAG TTCAAGGGCC GGATAGAAAT GAGGATAACG ATAAAGAGAT CTTTAGGCTT TGCCAGAGAC TTTCTAGACG GAATTATAGA AGAATTCGAT ATCCAGTCTC GCGAGAAATA TCGTCAAGAG GTCGAAGAAA AAATCGCTTT AGCGGAAAAA AGTCTAAGCG ATCTTCAAAA GTCAGAGGGT CCTGTATCCG ATTCTACTCT TGTCTCTTTG GGAATCACAG AAAAGGAGAG GAATGCTGAC AGTGAAGCTC TACGGAAGAA GCTGGTGTCT ATGATTAATG AATACAAAGT GGACCTTTTG ACTGCTGATG CATCTTCGAG CCTGATTGTG TTGGACAAGA CGAAGTCTGT TCCAGTGTCG AAGAAAGACT TATTGATCTT GATTATCAAT TTGGTTATGG GGTTGTTTTT TCCCATGATT ATCTTCTTTG TCTATATCAT TCTTCGTAAT CTCATATTGG TACCTTCGGA ACTTGGAGAA AAAGCACTCA AGCGTATATT AGCTCTATTG AATGGAAATA AGAAGAGAGC AGCCACGATG CAACGGGACA TCGACTTGCT TCGTCTCAAT CTGACTGAAT ACTTACCGGA TTCGGCTTCC TCTTGTATTA TTCTGACAGG CATGAGCGGT AACGAACAGA CCGAGAGGAT CGCGACGGAA TTGGTAAGTT CATTCGAGAA AAAGGGAAAG AATTTCCAAA TTCTCCACCT TGAAGAATCG GACGCTGCAC TCAAAGAGAT GACTGCTTTG CGTGAAAAGG GTATATCTGT TTTCGCTATT GCTCCGAGTG TAGTACGTAG TGCTTTGGCT GTTGAAGTTA GCTTTGGGGC GGATGTTTCC TTGTTGTTGG CTGAAAGTAT GCACTCGAAG AGAAATGATA AAGACGAAGT TGAAGCATTT ATCTGCCAAA GCCGCTGTCC TGCTTTTGTG CTATGGTTGG ATAGGTATTA A
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Protein sequence | MSDNCHLTEK SFRSVVLPKD SVLTLFFRIC LRNWYWILLS IVLFAGWGVV KYKRAGMAPS TYFTTVMARF PEGVQRACSG GLNPNYNVYD NYTPRWEGIS VLDQNSIFNG LCATSLVERV GEKIQYDVNY YLPGKVTNHD FYDHTPIHLI FSPESALSSF TVKMKVEKEH ATILSLKGKH DGEKVSIKDI RLPYGISVAT PIGELRVEKT PRFDYETSKK EFFSKPIIIV TKESKDKARV LYDSGLRTEE FKGRIEMRIT IKRSLGFARD FLDGIIEEFD IQSREKYRQE VEEKIALAEK SLSDLQKSEG PVSDSTLVSL GITEKERNAD SEALRKKLVS MINEYKVDLL TADASSSLIV LDKTKSVPVS KKDLLILIIN LVMGLFFPMI IFFVYIILRN LILVPSELGE KALKRILALL NGNKKRAATM QRDIDLLRLN LTEYLPDSAS SCIILTGMSG NEQTERIATE LVSSFEKKGK NFQILHLEES DAALKEMTAL REKGISVFAI APSVVRSALA VEVSFGADVS LLLAESMHSK RNDKDEVEAF ICQSRCPAFV LWLDRY
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