Gene PG0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPG0030 
Symbol 
ID2552653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePorphyromonas gingivalis W83 
KingdomBacteria 
Replicon accessionNC_002950 
Strand+ 
Start bp35986 
End bp36462 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content56% 
IMG OID637148847 
Productcytidine deaminase 
Protein accessionNP_904385 
Protein GI34539906 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0295] Cytidine deaminase 
TIGRFAM ID[TIGR01354] cytidine deaminase, homotetrameric 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGTA AAACTCTTTC CACTCCTTAT GATATAATTC CCCGATCGGA TTTCTCTGCC 
GATGTGCTCC GTCTGGAAGG TGCCGCCATC GAGGCAGCCC GGTCGGCATA TGCACCTTAT 
AGTCGCTTTT CGGTGGGAGC GGCTGTTTTG CTCGACAATG GGGAGATCCT TTCAGGCAGC 
AATCAGGAGA ATGCAGCCTA TCCGTCCGGA CTATGTGCCG AGCGTACGGT GCTTTTCTAT 
GCCGGAGCCA GATATCCGGA GGCAGCCGTG AGAGAGATGG TGCTCGTGGC TTTTTCCGCT 
TCGGGACGTG TGCCGCTGAT TACGCCGTGC GGGGCTTGCC GTCAGGTGAT GCTGGAGGTT 
TGTAGTCGCC ATCGTCCTTT TCCCATCTTG ATGGTCGGGG AAGAGGAGGC TGTCAGAGTG 
TCGGATGTGC GTCTGCTGCT GCCCTTTTCT TTCGACGGTA GCGACTTGGA ACGATAG
 
Protein sequence
MLRKTLSTPY DIIPRSDFSA DVLRLEGAAI EAARSAYAPY SRFSVGAAVL LDNGEILSGS 
NQENAAYPSG LCAERTVLFY AGARYPEAAV REMVLVAFSA SGRVPLITPC GACRQVMLEV 
CSRHRPFPIL MVGEEEAVRV SDVRLLLPFS FDGSDLER