| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5412 |
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| Symbol | atpC |
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| ID | 1042025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 6174747 |
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| End bp | 6175166 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637148810 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | NP_747512 |
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| Protein GI | 26992087 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00201274 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTATGA CAGTCCATTG CGATATCGTC AGCGCGGAAG GAGAGATCTT CTCCGGCCTG
GTCGAGATGG TGGTTGCGCA CGGTAACCTG GGTGATCTTG GTATCGCTCC AGGCCATGCG
CCGCTGATCA CCAATCTCAA GCCTGGTCCG ATCACGCTGA CCAAGCAGGG TGGCGCACAC
GAGGTGTTCT ACATCTCTGG TGGTTTCCTC GAGGTTCAGC CGAACATGGT CAAGGTGCTT
GCCGATACCG TGCAACGTGC TGCAGACCTG GATGAAGCTC AGGCTCAGGA GGCCCTCAAG
GCTGCCGAGA ACGCCCTGAA TCTGAAAGGC GCGGACTTCG ACTACGGCGC CGCCGCCGCA
CGTCTGGCCG AGGCCGCAGC CCAGCTGCGT ACCGTCCAGC AAATGCGCAA AGGCAAGTAA
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| Protein sequence | MAMTVHCDIV SAEGEIFSGL VEMVVAHGNL GDLGIAPGHA PLITNLKPGP ITLTKQGGAH
EVFYISGGFL EVQPNMVKVL ADTVQRAADL DEAQAQEALK AAENALNLKG ADFDYGAAAA
RLAEAAAQLR TVQQMRKGK
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