Gene PP_5411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5411 
SymbolglmU 
ID1045333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6173261 
End bp6174628 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content61% 
IMG OID637148809 
ProductUDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionNP_747511 
Protein GI26992086 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0026273 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCACTCG ATATCGTTAT TCTCGCCGCC GGCCAAGGCA CCCGCATGCG CTCGGCGCTG 
CCCAAAGTGT TGCACCCGGT AGCTGGCAAT TCCATGCTCG GCCATGTTAT CCACAGCGCG
CGTCAACTTC AGCCGCAAGG TATTCACGTG GTCATTGGCC ATGGTGCCGA GCTGGTTCGC
GAGCGGCTGG CTGCTGACGA CCTGAATTTC GTCATGCAGG ATAAACAGCT GGGTACCGGT
CATGCTGTTG CCCAGGCACT GCCAGCGCTG ACCGCTGACA CCGTGCTGGT GTTGTACGGC
GACGTGCCTT TGATCGAAGT GGAGACCCTG CAGCGTCTGT TGGCCAAAGC CAACGATCAG
CAGCTGGGGC TTCTGACAGT CACCCTCGAC GATCCGACCG GCTATGGCCG GATCGTGCGT
GACGAGCAGG GCAAGGTAAC TGCCATCGTT GAGCACAAGG ACGCCAACGA CGCGCAAAAA
GCGATCAAGG AAGGCAACAC CGGCATTCTG GCCTTGCCGG CCGCGCGCCT CGCCGACTGG
ATGGGCCGCC TGTCGAACAA CAACGCCCAG GGCGAGTACT ACCTGACTGA CGTAATCGCC
ATGGCAGTGG CCGATGGCTT GGTGGTGGCC ACTGAACAGC CACACGACGC TATGGAAGTG
CAGGGCGCCA ACGACCGCCG CCAACTCTCC GAGCTGGAGC GTCACTACCA GTTGCGTGAA
GGCCGCCGTC TGATGGCTCA GGGGGTTACC CTGCGTGATC CGGCACGCTT CGATGTTCGT
GGTGAAGTAA GCGTTGGTCG TGACGTGCTG ATCGACATCA ACGTGATTCT CGAAGGCAAG
GTGGTCATCG AAGACGATGT GCAGATCGGC CCTAACTGCG TGATCAAGAA CACGACCCTG
CGCAAAGGCG CGGTGGTCAA GGCCAACAGC CACCTCGAAG GCGCCGTGAT GGGCGAAGGC
AGCGATGCTG GCCCGTTTGC TCGCCTGCGC CCGGGCAGCG TACTGGACGC CAAGGCCCAT
GTGGGTAACT TCGTTGAACT GAAAAACGCC CACCTGGGTG AAGGGGCCAA GGCTGGTCAC
CTGACCTACC TGGGGGATGC CGAAATCGGT GCGCGCACCA ATATCGGCGC CGGCACCATC
ACCTGCAACT ACGATGGCGC CAACAAGTTC AAGACCGTGA TGGGTGAAGA CGTGTTCATC
GGTTCGAACA ACTCGCTGGT GGCGCCTGTG GAAATCAAGG CCGGCGCGAC CACCGCAGCC
GGCTCGACCA TCACCCAGGC TGTAGAAGCG GGTGACCTGG CTGTAGCCCG TGCGCGCCAG
CGCAACATTT CGGGCTGGAA GCGCCCGGAG AAGATCAAGA AGAGCTGA
 
Protein sequence
MSLDIVILAA GQGTRMRSAL PKVLHPVAGN SMLGHVIHSA RQLQPQGIHV VIGHGAELVR 
ERLAADDLNF VMQDKQLGTG HAVAQALPAL TADTVLVLYG DVPLIEVETL QRLLAKANDQ
QLGLLTVTLD DPTGYGRIVR DEQGKVTAIV EHKDANDAQK AIKEGNTGIL ALPAARLADW
MGRLSNNNAQ GEYYLTDVIA MAVADGLVVA TEQPHDAMEV QGANDRRQLS ELERHYQLRE
GRRLMAQGVT LRDPARFDVR GEVSVGRDVL IDINVILEGK VVIEDDVQIG PNCVIKNTTL
RKGAVVKANS HLEGAVMGEG SDAGPFARLR PGSVLDAKAH VGNFVELKNA HLGEGAKAGH
LTYLGDAEIG ARTNIGAGTI TCNYDGANKF KTVMGEDVFI GSNNSLVAPV EIKAGATTAA
GSTITQAVEA GDLAVARARQ RNISGWKRPE KIKKS