| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5409 |
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| Symbol | glmS |
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| ID | 1041649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 6170456 |
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| End bp | 6172291 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637148807 |
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| Product | glucosamine--fructose-6-phosphate aminotransferase |
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| Protein accession | NP_747509 |
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| Protein GI | 26992084 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
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| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.323982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00848262 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGTGGAA TCGTTGGTGC TGTCGCCGAG CGTAATATCA CAGCCATCCT GATCGAAGGC
CTTAAGCGTC TTGAATACCG CGGTTACGAC AGCGCCGGTT TGGCTGTACT CACCCAGAAC
GGTGAACTGC AGCGCCGCCG CCGCATCGGC AAGGTCAGCG AGCTGGAGGT TGCTGTTGCT
GATGACCCAT TGGCAGGCCA GCTGGGTATT GCCCACACCC GCTGGGCTAC TCACGGCGCG
CCGACTGAAG GCAACGCCCA CCCGCACTTC TCGGGCAATG ATGTGGCCGT GGTGCACAAC
GGCATCATCG AGAACCATGA GGAGCTGCGC GAAGAGCTGA AGGGCCTGGG CTATGTCTTC
ACTTCGCAGA CCGATACCGA AGTCATCGTC CACCTGATCC ACCACACCCT GAAGAGCATT
CCAGACCTGA CCGACGCCCT TAAGGCGGCG GTGAAGCGCC TGCACGGCGC TTACGGCCTG
GCGCTGATCA GTGCCAAGCA GCCGGACCGC CTGGTGGCAG CACGCAGTGG TAGCCCGCTG
GTTATCGGCC TGGGCCTTGG CGAGAACTTC CTGGCGTCCG ACCAGCTGGC GCTGCGTCAG
GTTACTGACC GCTTCATGTA CCTGGAAGAA GGCGACATCG CTGAAATCCG CCGTGATCAG
GTCTCTATCT GGGACCAGCA GGGCAACAAG GTCCAGCGCG AAACCGTGCA GTACCACGAA
GGTGCCGAGG CTGCCGACAA GGGCGCTTAC CGTCACTTCA TGCTCAAGGA AATTCACGAG
CAGCCAAGCG TTGTTCAGCG CACGCTTGAA GGCCGCCTGG GCAAGGACAA CGTGCTGGTC
CAGGCCTTTG GCCCGCAAGC TGCCGACCTG TTTGCCAAGG TGCGCAACGT GCAGATCGTT
GCCTGTGGCA CCAGCTACCA CGCCGGTATG GTTGCGCGCT ACTGGCTGGA AAGCCTGGCC
GGCATCCCTT GCCAGGTAGA AGTGGCCAGC GAGTTCCGTT ACCGCAAGGT GGTGGTGCAG
CCGGACACTC TGTTCGTCTC CATCTCGCAG TCCGGCGAAA CCGCCGATAC CTTGGCCGCA
CTGCGCAACG CCAAGGAGTT GGGTTTCCTT GGCAGCCTGG CGATCTGCAA CGTGGGTATC
AGCTCGCTGG TACGCGAGTC GGACTTGACC CTGCTGACCT TGGCCGGCCC TGAAATCGGC
GTGGCTTCGA CCAAAGCGTT CACCACTCAG CTGGTTTCGC TGATGCTGCT GACCCTGGCC
CTTGGTCAGG TGCGCGGTAC GCTGGAAGCC GGTGTCGAAG CTGAGCTGGT TGAAGAGCTG
CGTCGACTGC CTACCCGCCT GGGCGAAGCC CTGGCCATGG ATGCCACCGT CGAGAAAATT
GCCGAGCTGT TCGCCGACAA GCACCATACC CTGTTCCTCG GCCGCGGCGC GCAGTACCCG
GTGGCGATGG AAGGTGCTCT CAAGCTTAAA GAAATCTCCT ACATCCACGC CGAAGCATAC
CCAGCAGGCG AGCTGAAGCA CGGCCCGCTG GCTCTGGTGG ACAACGACAT GCCGGTGGTT
ACCGTTGCAC CGAACAACGA ACTGCTGGAG AAGCTGAAGT CCAACCTGCA GGAAGTGCGT
GCCCGTGGTG GCGAGCTGGT CGTGTTCGCC GACGAGCACG CTGGCATGAC CAATGGCGAA
GGCACCCACG TGATCAAGGT GCCGCACATT GCCGATGCCC TGGCGCCAAT CCTGTACACC
ATTCCGCTGC AGTTGCTGTC TTATTACGTG GCCGTGCTAA AGGGGACCGA CGTTGACCAG
CCTCGTAATC TGGCCAAGTC GGTGACTGTC GAGTAA
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| Protein sequence | MCGIVGAVAE RNITAILIEG LKRLEYRGYD SAGLAVLTQN GELQRRRRIG KVSELEVAVA
DDPLAGQLGI AHTRWATHGA PTEGNAHPHF SGNDVAVVHN GIIENHEELR EELKGLGYVF
TSQTDTEVIV HLIHHTLKSI PDLTDALKAA VKRLHGAYGL ALISAKQPDR LVAARSGSPL
VIGLGLGENF LASDQLALRQ VTDRFMYLEE GDIAEIRRDQ VSIWDQQGNK VQRETVQYHE
GAEAADKGAY RHFMLKEIHE QPSVVQRTLE GRLGKDNVLV QAFGPQAADL FAKVRNVQIV
ACGTSYHAGM VARYWLESLA GIPCQVEVAS EFRYRKVVVQ PDTLFVSISQ SGETADTLAA
LRNAKELGFL GSLAICNVGI SSLVRESDLT LLTLAGPEIG VASTKAFTTQ LVSLMLLTLA
LGQVRGTLEA GVEAELVEEL RRLPTRLGEA LAMDATVEKI AELFADKHHT LFLGRGAQYP
VAMEGALKLK EISYIHAEAY PAGELKHGPL ALVDNDMPVV TVAPNNELLE KLKSNLQEVR
ARGGELVVFA DEHAGMTNGE GTHVIKVPHI ADALAPILYT IPLQLLSYYV AVLKGTDVDQ
PRNLAKSVTV E
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