Gene PP_5400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5400 
Symbol 
ID1042033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6156551 
End bp6157618 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content55% 
IMG OID637148798 
Producthypothetical protein 
Protein accessionNP_747500 
Protein GI26992075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00302148 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCAGCGAA CTCTGTCGGT CAATCCGTCC CGCTTTCTGC TCATGGAGGT CGCAATGCCG 
GCCACTCAAA TTGATCGAAT CTTCGGGGCG CTGGAGTCAG CTGGCTATCC CCGTGAATTC
CAGAGTTCTC TGCTACCCGA CTGGGTGACC AGCGAGATGC TGCAGGATGA GGGAGCGACT
CTTGAAGTCG CATCAATCCT GGCCAAGCGA CTGGGGCTAC GCGTCGCGCC CTTGTTCTCC
GACAGTCCTG GGCTGGAAGA TCTGCGGCGC CGTGATACCA AGTACAAGCG CTCAATTCCC
AACAAATCGA AGAACCTTAG CGCGGCGACC TCCCTGGCGA TGTTTGTTGC AGAGTCCATT
GCCTACGCAA CCCCCTACGA ATACATCCCC TTTCCACAAG ACCCGTTGCA GTTCCGGAAC
GAGATTCTTG GAACAGAAGG TGGGAATTGG TTAGGCCTGC GGAATCTGCT GCAAGCATGT
TGGCGCCATG GCGTACCTGT GATCTATCTG GACGAGGTGT GCGAAGGACT ACCCAAGATG
GATGGCATGG TCACCATGTT CGAAGGGCGA CCTGTCATTA TCTTGTCCAA AAAAAGCAAG
TCGTGGGCCT GGCAATCCTT CATCATCGCT CACGAGATCG GACACTGCGC TTTAGGCCAT
ATCGACCTAG ATGAAATATT GATCGACGAG ACGTTGGGAG AGCAGTCGTA TGCACTGGAC
GATCCCGATG TAGACGAGCA GGCGGCAGAT CAGTATGCGA TCACCCTGCT AAACGGTCGA
GCAAACGCAA CCTACGGAAA TGGCACAGGC AACATGTCCG CATTGGGGCT TGCAGATGCG
GCCATGCAAT ATGGCAAGGC AAACCGTGTG GATCCCGGTC ATGTGGTACT GAATTTTGCC
AAGCACAATG ATGCCTGGGC GCTAGGAATG GCGGCGATCA AACTTCTACA GGCGGGTGAA
AAACCAGCCG GCATCGTAGT CAACGATCTG CTCTGGCGTT GTATTAGGCC GGATGTTCTC
CCTGACGACA CCATCGATCT CCTCTACCGT GTGGCTCCAG CCGAATAG
 
Protein sequence
MQRTLSVNPS RFLLMEVAMP ATQIDRIFGA LESAGYPREF QSSLLPDWVT SEMLQDEGAT 
LEVASILAKR LGLRVAPLFS DSPGLEDLRR RDTKYKRSIP NKSKNLSAAT SLAMFVAESI
AYATPYEYIP FPQDPLQFRN EILGTEGGNW LGLRNLLQAC WRHGVPVIYL DEVCEGLPKM
DGMVTMFEGR PVIILSKKSK SWAWQSFIIA HEIGHCALGH IDLDEILIDE TLGEQSYALD
DPDVDEQAAD QYAITLLNGR ANATYGNGTG NMSALGLADA AMQYGKANRV DPGHVVLNFA
KHNDAWALGM AAIKLLQAGE KPAGIVVNDL LWRCIRPDVL PDDTIDLLYR VAPAE