Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5400 |
Symbol | |
ID | 1042033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 6156551 |
End bp | 6157618 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637148798 |
Product | hypothetical protein |
Protein accession | NP_747500 |
Protein GI | 26992075 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00302148 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGCAGCGAA CTCTGTCGGT CAATCCGTCC CGCTTTCTGC TCATGGAGGT CGCAATGCCG GCCACTCAAA TTGATCGAAT CTTCGGGGCG CTGGAGTCAG CTGGCTATCC CCGTGAATTC CAGAGTTCTC TGCTACCCGA CTGGGTGACC AGCGAGATGC TGCAGGATGA GGGAGCGACT CTTGAAGTCG CATCAATCCT GGCCAAGCGA CTGGGGCTAC GCGTCGCGCC CTTGTTCTCC GACAGTCCTG GGCTGGAAGA TCTGCGGCGC CGTGATACCA AGTACAAGCG CTCAATTCCC AACAAATCGA AGAACCTTAG CGCGGCGACC TCCCTGGCGA TGTTTGTTGC AGAGTCCATT GCCTACGCAA CCCCCTACGA ATACATCCCC TTTCCACAAG ACCCGTTGCA GTTCCGGAAC GAGATTCTTG GAACAGAAGG TGGGAATTGG TTAGGCCTGC GGAATCTGCT GCAAGCATGT TGGCGCCATG GCGTACCTGT GATCTATCTG GACGAGGTGT GCGAAGGACT ACCCAAGATG GATGGCATGG TCACCATGTT CGAAGGGCGA CCTGTCATTA TCTTGTCCAA AAAAAGCAAG TCGTGGGCCT GGCAATCCTT CATCATCGCT CACGAGATCG GACACTGCGC TTTAGGCCAT ATCGACCTAG ATGAAATATT GATCGACGAG ACGTTGGGAG AGCAGTCGTA TGCACTGGAC GATCCCGATG TAGACGAGCA GGCGGCAGAT CAGTATGCGA TCACCCTGCT AAACGGTCGA GCAAACGCAA CCTACGGAAA TGGCACAGGC AACATGTCCG CATTGGGGCT TGCAGATGCG GCCATGCAAT ATGGCAAGGC AAACCGTGTG GATCCCGGTC ATGTGGTACT GAATTTTGCC AAGCACAATG ATGCCTGGGC GCTAGGAATG GCGGCGATCA AACTTCTACA GGCGGGTGAA AAACCAGCCG GCATCGTAGT CAACGATCTG CTCTGGCGTT GTATTAGGCC GGATGTTCTC CCTGACGACA CCATCGATCT CCTCTACCGT GTGGCTCCAG CCGAATAG
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Protein sequence | MQRTLSVNPS RFLLMEVAMP ATQIDRIFGA LESAGYPREF QSSLLPDWVT SEMLQDEGAT LEVASILAKR LGLRVAPLFS DSPGLEDLRR RDTKYKRSIP NKSKNLSAAT SLAMFVAESI AYATPYEYIP FPQDPLQFRN EILGTEGGNW LGLRNLLQAC WRHGVPVIYL DEVCEGLPKM DGMVTMFEGR PVIILSKKSK SWAWQSFIIA HEIGHCALGH IDLDEILIDE TLGEQSYALD DPDVDEQAAD QYAITLLNGR ANATYGNGTG NMSALGLADA AMQYGKANRV DPGHVVLNFA KHNDAWALGM AAIKLLQAGE KPAGIVVNDL LWRCIRPDVL PDDTIDLLYR VAPAE
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