Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5398 |
Symbol | |
ID | 1046068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 6154860 |
End bp | 6155180 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637148796 |
Product | ISPpu14, transposase Orf1 |
Protein accession | NP_747498 |
Protein GI | 26992073 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2963] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.180898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00224199 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCCAAC GAAGCTCTTA TCCGAAACCG TTCAAAGCCC AGGTCGTTCA GGAATGCCTG CAACCTGGCG CAACCGTGTC CAGTGTCGCC ATCAGCCACG GCATCAATGC CAACGTCATC CGCAAATGGC TGCCGCTTTA TCGAGATCAG CCTGCAGCAG CTTCAATACC GGCATTCGTC CCACTAAAAA CCGCGCCTAA ACGGCCAGTC GAAGCGTCAG TGATCATCGA GTTGCCTATG ACCGGGCAAG TGATCACGGT GAAATGGCCA ACCTCAGATC CTGAGGGCTG CGCGCAATTT ATCCGGGCTG TCGCTCAATG A
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Protein sequence | MRQRSSYPKP FKAQVVQECL QPGATVSSVA ISHGINANVI RKWLPLYRDQ PAAASIPAFV PLKTAPKRPV EASVIIELPM TGQVITVKWP TSDPEGCAQF IRAVAQ
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