Gene PP_5397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5397 
Symbol 
ID1042059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6154528 
End bp6154863 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content63% 
IMG OID637148795 
ProductISPpu14, transposase Orf2 
Protein accessionNP_747497 
Protein GI26992072 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.162705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00237418 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCCGCA TCGATGCGAT CTGGCTGGCC ACCGAGCCGA TGGATATGCG CGCCGGCACC 
GAAACGGCAT TGGCCCGGGT GATCGCGGTG TTCGGTGCGG CGAAGCCGCA CTGCGCTTAT
CTGTTCGCCA ATCGCCGGGC CAACCGGATG AAGGTGCTGG TGCACGACGG CGTGGGCGTC
TGGCTTGCAG CGCGACGACT GAATCAAGGC AAGTTTCACT GGCCCGGCAT TCGCCATGGC
AGCGAGGTCG AACTCGACAG CGAACAACTC CAGGCGTTGG TACTGGGTTT GCCATGGCTG
CGCGTTGGTG CAGGCGGTGT GATCAGCATG CTGTAA
 
Protein sequence
MIRIDAIWLA TEPMDMRAGT ETALARVIAV FGAAKPHCAY LFANRRANRM KVLVHDGVGV 
WLAARRLNQG KFHWPGIRHG SEVELDSEQL QALVLGLPWL RVGAGGVISM L