Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5392 |
Symbol | |
ID | 1042052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 6146318 |
End bp | 6147451 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637148791 |
Product | YVTN family beta-propeller repeat-containing protein |
Protein accession | NP_747493 |
Protein GI | 26992068 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0101451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACGTTG ACGCTGATCA AGAAAATGCT TCGCGATTGG TGTTTATCTT GAGTGAATGC ATAGGTCAGC CTGGTTCACA TACCCCGGCC TCTCGTTGGA GCTCATTCAC CATGATGACT GCCAAGCGGT TTAGTTCTAT GGCCTTGGGG ATATCCCTGC TCATCCCTCT GGGGCTGGTC ATGGCAAACC CTACGGGTAA CGTTTACACG GCCAATGAAC GGTCCGCTTC CATTAGCCAG GTAAATCTTG CGACAGGTGA TGTGAGCACG GTCGCCTTGC CGATCGCACC CCACAACCTA CAGGTTTCGC CCGACGGCAG CTTGCTTCTG GTTGTTGGAG TGGCTGGACA TGCGGGGCAT TCGAGTGGTG AAAAGCCCGG TGGGCAGTTG CTGGTGTTCA GTACCAGCGC GCTGGACAGA CCACCGTTCA GCTTCCCGGC AGGCGATCAC CCGGCTCATG TGATCACCGA CGTCACCGGG CTGCGAGCTT TCGTGACCGA TTCCGCTGCC AACCGGGTAC GAATATTTGA CCTTGAGCAG CGAATCGAGT TGCCCGGTAT TCCAACTGGG CGTTATCCCC ATGGGCTGCG CTTGAGCCCT GATGGCCGGA CGCTCTATAT CGCGAACATG AAGAGCGACA GCGTATCGCT TATCGACGTC GTCACACTCA AAGAAACCGC GCAGATTCCC GTAGGTAAAG GCCCTGTCCA GGTCGGCTTT GCCCCCGACG GTCGCCTGGC ATTCGTCTCG CTCAGTGCGA CAAATCAGCT TGGCATCATC GACACGGCCA GACGCAAGGT GATCGGCAAG GTTGATGTCG GCCGCACGCC AATCCAGATG ATGGCCACCG TTGACGGTCG CCAGGTCTAT GTCGCGAACC AGGGCAGCGG CCAGAATCCG GACGACCGAG TCTCCATCGT AGATATCCAG ACGCGTAGCA GCCTGGGCAC CGTGACCACC GGCAAGGGTG CCCATGGTGT GGCCATCAGC AGCGACGGCG CTTATGTGTT TGTCAGCAAT ATTGAAGCAG GCACCGTATC TGTCATCGAT ACGAGCAGCC GTAAGGTCGT TGCTACCCAT AAGGTTGGCG CCGGGCCAAA CGGGATCAGC TTCGAGCCGC CGAGTGCCCA ATAG
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Protein sequence | MDVDADQENA SRLVFILSEC IGQPGSHTPA SRWSSFTMMT AKRFSSMALG ISLLIPLGLV MANPTGNVYT ANERSASISQ VNLATGDVST VALPIAPHNL QVSPDGSLLL VVGVAGHAGH SSGEKPGGQL LVFSTSALDR PPFSFPAGDH PAHVITDVTG LRAFVTDSAA NRVRIFDLEQ RIELPGIPTG RYPHGLRLSP DGRTLYIANM KSDSVSLIDV VTLKETAQIP VGKGPVQVGF APDGRLAFVS LSATNQLGII DTARRKVIGK VDVGRTPIQM MATVDGRQVY VANQGSGQNP DDRVSIVDIQ TRSSLGTVTT GKGAHGVAIS SDGAYVFVSN IEAGTVSVID TSSRKVVATH KVGAGPNGIS FEPPSAQ
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