Gene PP_5388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5388 
Symbol 
ID1042071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6143410 
End bp6143751 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content53% 
IMG OID637148787 
Producthypothetical protein 
Protein accessionNP_747489 
Protein GI26992064 
COG category[S] Function unknown 
COG ID[COG5569] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.141167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC TCTACCTCAG CATTGCACTG CTCTTTGCCT TCGCATCAGG CGCGCAAGCC 
CAAGACTCCA TGGCCGGGAT GAGCATGGAT GGAATGGATA TGAAGGAAAC CCAATCAGCA
CCTTCCGCTC ATGCAGAAGG GACGGTAAAG GCAATTGACG CCCAAGGCGG CACAGTGACC
CTGATGCATG GACCGGTTGC TGCGTTGAAA TGGCCGGCCA TGACCATGGC CTTCAAAGCC
TCTGCGCAAC AGCTCGATGG ATTGAAGGTG GGAGACAACG TAGAGTTTGA TTTCCGGATG
GATGGCAGCA CGGCAACGAT TGTTGATATT CGCAAACAGT AA
 
Protein sequence
MKKLYLSIAL LFAFASGAQA QDSMAGMSMD GMDMKETQSA PSAHAEGTVK AIDAQGGTVT 
LMHGPVAALK WPAMTMAFKA SAQQLDGLKV GDNVEFDFRM DGSTATIVDI RKQ