| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5380 |
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| Symbol | copA |
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| ID | 1042128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 6131833 |
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| End bp | 6133842 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637148779 |
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| Product | copper resistance protein A |
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| Protein accession | NP_747481 |
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| Protein GI | 26992056 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.537951 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCA AAACCACGAG ACGATCTTTC GTCAAAGGCC TGGCCGCTAC TGGATTACTG
GGTGGACTGG GCATGTGGCG CGCGCCGGTC TGGGCTGTGA CCAGCCCTGG CCAACCGAAT
GTTCTGACAG GCACCGATTT TGATCTCTAC ATCGGTGAGT TGCCGGTCAA CATTACCGGC
ACTGTACGTA CAGCGATGGC AATCAACGGC TCCATTCCCG GGCCCATCCT GCGCTGGCGC
GAGGGCGATA CCGTCACGCT GCGTGTGCGC AACCGCTTGC AGCAGGACAC CTCCATCCAC
TGGCACGGCA TCATCCTGCC GGCGAACATG GACGGCGTGC CGGGCCTGAG CTTCCATGGC
ATCGCCCCAG ACGGCATGTA TGAGTACAAG TTCAAGGTCC AGCAGAACGG CACCTACTGG
TACCACAGCC ACTCCGGTTT CCAGGAGCAG GTCGGGGTGT ATGGTGCCCT GGTCATCGAT
GCGAAAGAAC CTGAGCCGTT CACCTATGAC CGGGACTACG TGGTCATGCT CAGCGACTGG
ACGGATGAAG ACCCTGCACG GGTGCTGTCC AAGCTCAAGA AGCAGTCCGA CTACTACAAC
TACCACAAGC GCACGGTGGG CGATTTCGTC AACGATGTGA GCGAAATGGG CTGGTCCGCC
GCGGTAGCCG ACCGCAAGAT GTGGGCCGAG ATGAAAATGA GCCCCACCGA TCTCGCTGAT
GTGAGCGGCT ACACCTACAC CTACCTGATG AACGGCCAGG CCCCGGACGG TAACTGGACG
GGCGTGTTCA AGCCGGGCGA GAAAATCCGC CTGCGCTTCA TCAATGGCTC GGCCATGACG
TATTTCGATG TGCGAATTCC CGGCCTGAAG ATGACGGTTG TCGCGGCGGA TGGGCAGCAT
GTCAAACGCG TTGCGGTCGA CGAGTTCCGC ATCGCCGTTG CCGAAACCTA CGACGTCATT
GTTGAGCCGG AAGACGAGCA GGCTTACACC ATTTTTGCTC AATCCATGGA TCGCACAGGC
TACTCCAGAG GCACTTTAGC CGTTCGCGAA GGTATGCAAG CTGCAGTTCC GGCAGTTGAT
CCGCGCCCTC TCATCTCAAT GAGTGATATG GGTATGGATC ACGGCAGCAT GGCCGGCATG
GACCACGGCA ACATGGCCGG TATGGACCAC AGCAAAATGG CTGGGATGGA CCACGGCAAC
ATGGCCGGCA TGGACCACAG CAAAATGGCT GGGATGGACC ACGGCAACAT GACCGGCATG
GACCACAGCA AAATGGCTGG GATGGACCAT GGCAGCATGG CCGGCATGGA TCACAGCAAA
ATGGCTGAGA TGGACCACGG CGGCATGGCC GGCATGGACC ACAGCAAGAT GGCTGGGATG
GACCAAGGCG GCATGGCCGA TATGGACCAT AGCAAGATGG CTGGGATGGA CCAAGGCGGC
ATGGCCGATA TGGACCACAG CAGCATGGAA GGTATGGGTG GCGCCATGCA GTCTCACCCA
GCCTCAGAGA CTAACAACCC CTTGGTCGAC ATGCAGACTA TGAGTCCAAC GCCTAAGTTG
GACGATCCGG GAATCGGCTT GCGCAACAAT GGACGTCGTG TCCTGACCTA TGCGGATCTG
CGAAGCACGT TCATTGATCC AGATGGACGT GAACCAGGGC GCACCATCGA GCTGCATCTC
ACAGGCCATA TGGAGAAGTT CGCCTGGTCA TTTGACGGCG TCAAATTTTC CGATGCTGAA
CCCCTACGCC TCAAATATGG CGAGCGTCTG CGAATCACTT TGGTCAACGA CACCATGATG
ACTCACCCCA TCCACCTCCA CGGAATGTGG AGCGATCTGG AGGATGAGGA CGGTAATTTC
ATGGTTCGAA AACACACCAT CGACATGCCT CCAGGCTCAA AACGAAGCTA CCGAGTAACC
GCGGATGCTT TGGGCCGTTG GGCCTACCAC TGCCACCTAC TGTTCCATAT GGAAATGGGC
ATGTTCCGAG AAGTCCGCGT GGACGAATGA
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| Protein sequence | MQSKTTRRSF VKGLAATGLL GGLGMWRAPV WAVTSPGQPN VLTGTDFDLY IGELPVNITG
TVRTAMAING SIPGPILRWR EGDTVTLRVR NRLQQDTSIH WHGIILPANM DGVPGLSFHG
IAPDGMYEYK FKVQQNGTYW YHSHSGFQEQ VGVYGALVID AKEPEPFTYD RDYVVMLSDW
TDEDPARVLS KLKKQSDYYN YHKRTVGDFV NDVSEMGWSA AVADRKMWAE MKMSPTDLAD
VSGYTYTYLM NGQAPDGNWT GVFKPGEKIR LRFINGSAMT YFDVRIPGLK MTVVAADGQH
VKRVAVDEFR IAVAETYDVI VEPEDEQAYT IFAQSMDRTG YSRGTLAVRE GMQAAVPAVD
PRPLISMSDM GMDHGSMAGM DHGNMAGMDH SKMAGMDHGN MAGMDHSKMA GMDHGNMTGM
DHSKMAGMDH GSMAGMDHSK MAEMDHGGMA GMDHSKMAGM DQGGMADMDH SKMAGMDQGG
MADMDHSSME GMGGAMQSHP ASETNNPLVD MQTMSPTPKL DDPGIGLRNN GRRVLTYADL
RSTFIDPDGR EPGRTIELHL TGHMEKFAWS FDGVKFSDAE PLRLKYGERL RITLVNDTMM
THPIHLHGMW SDLEDEDGNF MVRKHTIDMP PGSKRSYRVT ADALGRWAYH CHLLFHMEMG
MFREVRVDE
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