| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5355 |
|---|
| Symbol | |
|---|
| ID | 1042131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 6104688 |
|---|
| End bp | 6106448 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637148754 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | NP_747456 |
|---|
| Protein GI | 26992031 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.547992 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGCCA TCAGCTTCAT CCAGGACCTG GCAGTCATCA TGCTGGTCGC TGGCGTGGTC
ACCATTCTTT TTCACCGTTT CAAGCAGCCG GTGGTGCTGG GCTACATTGT CGCCGGCTTC
ATCATTGGCC CGCACACTCC GCCATTCGGC CTGATTCATG ACGAAGACAC CATCAAGACC
CTCGCCGAAC TGGGGGTGAT CTTCCTGATG TTCTGCCTGG GGCTCGAGTT CAGCTTGCGC
AAGCTGTTCA AGGTCGGTGC CACGGCGTTC ATCGCAGCGT TCCTGGAAAT CGTCCTGATG
ATCTGGATCG GTTTTGAGAT TGGCCGCTGG TTTGGCTGGA GCACCATGGA TTCACTGTTC
CTGGGCGCCA TCCTGGCCAT TTCCTCCACC ACCATCATCG TCAAGGCGCT CAACGACTTG
AAGATGAAGA ACGAGCGCTT TGCCCAGCTG ATCTTCGGCG TGCTGATCGT CGAGGACATT
CTTGGCATCG GTATCATTGC CCTGCTGTCG GGTATCGCGG TCAGCGGCAC GGTCAGCTCG
GGCGAGGTGT TCTCCACAGT CGGCAAGCTG TCGCTGTTCA TGGTTGTCGC TCTGGTCATC
GGTATTTTGC TGGTGCCGCG GTTATTGGCC TACGTCGCAA GGTTCGAAAG CAACGAAATG
TTGCTGATCA CCGTTCTGGG CCTGTGTTTC GGCTTCTGCC TGCTGGTCGT GAAGCTGGAA
TACAGTATGG TTCTGGGCGC TTTCCTGATT GGCGCGATCA TGGCCGAATC ACGCCAGTTG
TTGAAGATTG AACGCTTGAT TGAGCCCGTA CGCGACCTGT TCAGCGCCAT ATTCTTCGTC
GCCATCGGTA TGATGATTGA TCCTGAGGTG CTCATCGACT ATGCCTGGCC GATCGTAGTC
ATCACCCTGG CGGTGGTACT GGGCAAGATG CTGTCTTGCG GCATGGGGGC GTTTATAGCC
GGCAATGACG GGCGTACGTC TTTACGCGTG GGCATGGGGC TTTCGCAGAT TGGCGAGTTC
TCTTTCATCA TCGCCGCGCT GGGCATGACC CTGCAGGTGA CCAGCGACTT CCTATACCCG
GTGGCGGTCG CAGTATCGGC AATCACTACG TTGCTGACAC CCTACCTGAT CCGCGCGGCT
GACCCGTTGT CGCAGAAACT GGGCAATGTG GTGCCCGCCC GCCTCGCGCG CGTGCTGTCG
TTGTATGGCG AGTGGTTGCG CAACATCCAG CCGCAGGGCG AGAGTGCCAT GCTGGCGGCG
ATGATCCGGC GCATCCTGTT GCAGGTGGGG GTGAACCTGG CGCTGGTGAT CGCCATCTTC
TTCAGTGGCG GTTATTTTGC AGGGCGTCTC GGCAATTGGC TCAGCGAGTG GGTCAGCGAT
GTCAGCCATC AGAAGGCCGT CATTTGGGGG GCAGCGTTGT TGCTGTCACT GCCATTCCTG
ATCGCCGCGT ACCGCAAGCT AAAAGCACTC TCGATGCTGC TGGCAGAGAT GGGCGTGAAG
CCGGAAATGG CCGGGCGACA TACCCAGCGC GTGCGCCGTG TGATCGCCGA AGTGATCCCG
CTGTTGTCGC TGTTGGTGAT TTTCCTGCTG CTGTCGGCAT TGTCCGCCAG CATTCTGCCC
ACCAGCGAAT TGCTGCTGGT GATTGCCGTG GTAGCTGCGG TGGTGGTGGC GTTGTTGTGG
CGCTGGCTCA TCCGCGTGCA CACGCGCATG CAGATCGCGT TGCTGGAGAC GCTGGAGAAC
AGTCGCGAGA ACTCGCACTG A
|
|---|
| Protein sequence | MHAISFIQDL AVIMLVAGVV TILFHRFKQP VVLGYIVAGF IIGPHTPPFG LIHDEDTIKT
LAELGVIFLM FCLGLEFSLR KLFKVGATAF IAAFLEIVLM IWIGFEIGRW FGWSTMDSLF
LGAILAISST TIIVKALNDL KMKNERFAQL IFGVLIVEDI LGIGIIALLS GIAVSGTVSS
GEVFSTVGKL SLFMVVALVI GILLVPRLLA YVARFESNEM LLITVLGLCF GFCLLVVKLE
YSMVLGAFLI GAIMAESRQL LKIERLIEPV RDLFSAIFFV AIGMMIDPEV LIDYAWPIVV
ITLAVVLGKM LSCGMGAFIA GNDGRTSLRV GMGLSQIGEF SFIIAALGMT LQVTSDFLYP
VAVAVSAITT LLTPYLIRAA DPLSQKLGNV VPARLARVLS LYGEWLRNIQ PQGESAMLAA
MIRRILLQVG VNLALVIAIF FSGGYFAGRL GNWLSEWVSD VSHQKAVIWG AALLLSLPFL
IAAYRKLKAL SMLLAEMGVK PEMAGRHTQR VRRVIAEVIP LLSLLVIFLL LSALSASILP
TSELLLVIAV VAAVVVALLW RWLIRVHTRM QIALLETLEN SRENSH
|
|---|
| |